Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 6.2e-42 173.7 88 100.0
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 2.1e-34 148.7 75 98.7
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 1.5e-27 125.9 72 86.1
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 1.3e-23 112.8 63 85.7
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 5.5e-22 107.5 79 69.6
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 2.1e-21 105.5 63 81.0
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 2.1e-21 105.5 63 81.0
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.0e-20 103.2 69 71.0
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 3.0e-20 101.7 63 77.8
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 6.7e-20 100.5 83 66.3
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 1.9e-19 99.0 62 77.4
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 6.3e-18 94.0 64 68.8
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 6.3e-18 94.0 67 68.7
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 1.1e-17 93.2 65 70.8
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 1.4e-17 92.8 64 68.8
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 1.4e-17 92.8 83 61.4
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.2e-16 89.7 63 69.8
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 1.2e-16 89.7 64 67.2
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 1.5e-16 89.4 64 68.8
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 2.0e-16 89.0 64 65.6
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 2.0e-16 89.0 59 72.9
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 4.5e-16 87.8 64 65.6
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 7.7e-16 87.0 64 65.6
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 1.0e-15 86.7 64 67.2
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 1.3e-15 86.3 64 65.6
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 1.7e-15 85.9 61 72.1
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 3.8e-15 84.7 64 64.1
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 3.8e-15 84.7 64 67.2
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 6.5e-15 84.0 64 62.5
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.4e-14 82.8 64 59.4
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.9e-14 82.4 63 60.3
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 4.2e-14 81.3 63 63.5
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 4.2e-14 81.3 63 63.5
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 9.4e-14 80.1 65 66.2
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 3.6e-13 78.2 66 62.1
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 7.9e-13 77.0 65 56.9
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 1.0e-12 76.6 68 64.7
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 1.0e-12 76.6 68 64.7
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 1.0e-12 76.6 68 64.7
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 2.3e-12 75.5 68 64.7
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 2.3e-12 75.5 59 61.0
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 1.5e-11 72.8 72 54.2
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 2.0e-11 72.4 68 60.3
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 7.4e-11 70.5 64 57.8
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 4.8e-10 67.8 64 48.4
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 8.2e-10 67.0 41 75.6
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 5.3e-09 64.3 64 46.9
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 1.7e-07 59.3 59 50.8
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.7e-07 59.3 61 49.2
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.7e-07 59.3 61 49.2
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 2.2e-07 58.9 32 90.6
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 1.9e-06 55.8 64 43.8
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 2.5e-06 55.5 65 46.2
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 7.2e-06 53.9 64 43.8
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 7.2e-06 53.9 64 43.8
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 7.2e-06 53.9 40 57.5


User provided reference genes

Program Settings