Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006125 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 7.1e-74 280.4 132 100.0
CSS0008026 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 3.3e-31 138.7 102 72.5
CSS0043173 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 3.3e-31 138.7 102 72.5
Actinidia14385 Actinidia chinensis HOM05D001613 ORTHO05D001556 1.3e-30 136.7 102 70.6
CSS0001116 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 2.2e-30 136.0 110 68.2
Dinv20217 Davidia involucrata HOM05D000599 ORTHO05D006883 4.8e-30 134.8 99 71.7
vmacro11900 Vaccinium macrocarpon HOM05D000599 ORTHO05D006883 6.3e-30 134.4 101 69.3
QL08p023388 Quercus lobata HOM05D000599 ORTHO05D006883 1.1e-29 133.7 118 58.5
Rhsim06G0203600 Rhododendron simsii HOM05D000599 ORTHO05D006883 1.8e-29 132.9 101 68.3
Atru.chr2.2379 Acer truncatum HOM05D000599 ORTHO05D006883 2.4e-29 132.5 99 68.7
Manes.12G158400 Manihot esculenta HOM05D000599 ORTHO05D006883 6.9e-29 131.0 99 67.7
CANSAT35G1865 Cannabis sativa HOM05D000599 ORTHO05D006883 9.1e-29 130.6 99 68.7
Lj1A836G33 Lonicera japonica HOM05D000599 ORTHO05D006883 9.1e-29 130.6 99 69.7
TWI38G1662 Tripterygium wilfordii HOM05D000599 ORTHO05D006883 9.1e-29 130.6 99 67.7
CsaV3_3G019590 Cucumis sativus L. HOM05D000599 ORTHO05D006883 1.2e-28 130.2 99 67.7
GSVIVG01014259001 Vitis vinifera HOM05D000599 ORTHO05D006883 1.2e-28 130.2 99 68.7
Cpa.g.sc80.13 Carica papaya HOM05D000599 ORTHO05D006883 2.6e-28 129.0 99 66.7
ClCG05G009200 Citrullus lanatus HOM05D000599 ORTHO05D006883 2.6e-28 129.0 99 66.7
TAR627G0901 Trochodendron aralioides HOM05D000599 ORTHO05D006883 2.6e-28 129.0 99 67.7
arahy.Tifrunner.gnm1.ann1.10FGX8 Arachis hypogaea HOM05D000599 ORTHO05D006883 3.4e-28 128.6 99 67.7
arahy.Tifrunner.gnm1.ann1.PD8C8E Arachis hypogaea HOM05D000599 ORTHO05D006883 3.4e-28 128.6 99 67.7
MELO3C019391.2 Cucumis melo HOM05D000599 ORTHO05D006883 3.4e-28 128.6 99 66.7
Sed0014270 Sechium edule HOM05D000599 ORTHO05D006883 3.4e-28 128.6 99 65.7
Nn1g04277 Nelumbo nucifera HOM05D000599 ORTHO05D006883 4.5e-28 128.3 99 66.7
Duzib170G0842 Durio zibethinus HOM05D000599 ORTHO05D006883 5.9e-28 127.9 99 66.7
Cfa020625 Carpinus fangiana HOM05D000599 ORTHO05D006883 7.7e-28 127.5 99 65.7
Potri.001G373200 Populus trichocarpa HOM05D000599 ORTHO05D006883 7.7e-28 127.5 99 65.7
PGR083G0548 Punica granatum HOM05D000599 ORTHO05D006883 7.7e-28 127.5 99 66.7
Gohir.D01G046600 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.0e-27 127.1 99 65.7
MBI06_g45594_MAGBIO Magnolia biondii HOM05D000599 ORTHO05D006883 1.0e-27 127.1 99 65.7
Thecc.07G100100 Theobroma cacao HOM05D000599 ORTHO05D006883 1.0e-27 127.1 99 65.7
Duzib213G1012 Durio zibethinus HOM05D000599 ORTHO05D006883 1.3e-27 126.7 99 66.7
HanXRQChr10g0302461 Helianthus annuus HOM05D000599 ORTHO05D006883 1.3e-27 126.7 98 68.4
Lalb_Chr25g0286171 Lupinus albus HOM05D000599 ORTHO05D006883 1.3e-27 126.7 99 65.7
PSO210G4318 Papaver somniferum HOM05D000599 ORTHO05D006883 1.7e-27 126.3 98 67.3
Lj3g0008187 Lotus japonicus HOM05D000599 ORTHO05D006883 2.2e-27 125.9 98 66.3
Peaxi162Scf00000g00284 Petunia axillaris HOM05D000599 ORTHO05D006883 2.2e-27 125.9 99 65.7
Prupe.4G173000 Prunus persica HOM05D000599 ORTHO05D006883 2.2e-27 125.9 99 64.6
HPP92_021507 Vanilla planifolia HOM05D000599 ORTHO05D006883 2.2e-27 125.9 99 66.7
Cc05_g11570 Coffea canephora HOM05D000599 ORTHO05D006883 2.9e-27 125.6 98 66.3
DCAR_021003 Daucus carota HOM05D000599 ORTHO05D006883 3.8e-27 125.2 98 67.3
Gorai.002G066100 Gossypium raimondii HOM05D000599 ORTHO05D006883 3.8e-27 125.2 99 64.6
Nitab4.5_0003033g0020 Nicotiana tabacum HOM05D000599 ORTHO05D006883 3.8e-27 125.2 98 66.3
Solyc12g014050.2 Solanum lycopersicum HOM05D000599 ORTHO05D006883 3.8e-27 125.2 99 65.7
Sopen12g005790 Solanum pennellii HOM05D000599 ORTHO05D006883 3.8e-27 125.2 99 65.7
Glyma.12G227400 Glycine max HOM05D000599 ORTHO05D006883 5.0e-27 124.8 98 66.3
PSO832G3682 Papaver somniferum HOM05D000599 ORTHO05D006883 5.0e-27 124.8 98 66.3
Psat5g241360 Pisum sativum HOM05D000599 ORTHO05D006883 5.0e-27 124.8 98 65.3
Sabra16G0245600 Salix brachista HOM05D000599 ORTHO05D006883 5.0e-27 124.8 99 64.6
Haze_09378 Corylus avellana HOM05D000599 ORTHO05D006883 6.5e-27 124.4 99 64.6
HPP92_021512 Vanilla planifolia HOM05D000599 ORTHO05D006883 6.5e-27 124.4 99 65.7
ECA234G4269 Erigeron canadensis HOM05D001613 ORTHO05D006883 8.5e-27 124.0 98 68.4
CAN.G329.7 Capsicum annuum HOM05D000599 ORTHO05D006883 1.1e-26 123.6 99 65.7
RcHm_v2.0_Chr5g0031931 Rosa chinensis HOM05D000599 ORTHO05D006883 1.1e-26 123.6 99 64.6
RcHm_v2.0_Chr5g0032041 Rosa chinensis HOM05D000599 ORTHO05D006883 1.1e-26 123.6 99 64.6
Sc16g0007340 Simmondsia chinensis HOM05D000599 ORTHO05D006883 1.1e-26 123.6 99 67.7
PGSC0003DMG400015372 Solanum tuberosum HOM05D000599 ORTHO05D006883 1.1e-26 123.6 99 64.6
Migut.M00767 Erythranthe guttata HOM05D000599 ORTHO05D006883 1.4e-26 123.2 98 65.3
Ciclev10008721m.g Citrus clementina HOM05D000599 ORTHO05D006883 1.9e-26 122.9 99 61.6
Eucgr.F01180 Eucalyptus grandis HOM05D000599 ORTHO05D006883 2.5e-26 122.5 99 63.6
Aqoxy4G00576 Aquilegia oxysepala HOM05D000599 ORTHO05D006883 3.2e-26 122.1 99 62.6
DCAR_019576 Daucus carota HOM05D000599 ORTHO05D006883 3.2e-26 122.1 98 64.3
FvH4_3g19130 Fragaria vesca HOM05D000599 ORTHO05D006883 3.2e-26 122.1 99 63.6
FAN11G3855 Fragaria x ananassa HOM05D000599 ORTHO05D006883 3.2e-26 122.1 99 63.6
FAN16G1937 Fragaria x ananassa HOM05D000599 ORTHO05D006883 3.2e-26 122.1 99 63.6
FAN21G2449 Fragaria x ananassa HOM05D000599 ORTHO05D006883 3.2e-26 122.1 99 63.6
THA.LOC104810454 Tarenaya hassleriana HOM05D000599 ORTHO05D006883 3.2e-26 122.1 98 63.3
Mapoly0049s0129 Marchantia polymorpha HOM05D000599 ORTHO05D006883 4.2e-26 121.7 98 63.3
Os01g0753100 Oryza sativa ssp. japonica HOM05D000599 ORTHO05D006883 4.2e-26 121.7 99 60.6
SalBow7G1016 Salvia bowleyana HOM05D000599 ORTHO05D006883 4.2e-26 121.7 98 65.3
CiPaw.11G166300 Carya illinoinensis HOM05D000599 ORTHO05D006883 5.5e-26 121.3 99 61.6
ATR0602G106 Amborella trichopoda HOM05D000599 ORTHO05D006883 7.2e-26 120.9 99 63.6
AT3G15090 Arabidopsis thaliana HOM05D000599 ORTHO05D006883 7.2e-26 120.9 98 64.3
Glyma.13G272900 Glycine max HOM05D000599 ORTHO05D006883 7.2e-26 120.9 98 64.3
Medtr2g078520 Medicago truncatula HOM05D000599 ORTHO05D006883 9.4e-26 120.6 98 64.3
CARHR090050 Cardamine hirsuta HOM05D000599 ORTHO05D006883 1.2e-25 120.2 98 63.3
A03p39150 Brassica napus HOM05D000599 ORTHO05D006883 1.6e-25 119.8 99 61.6
CiPaw.12G116700 Carya illinoinensis HOM05D000599 ORTHO05D006883 2.1e-25 119.4 99 60.6
unitig_52.g17400 Utricularia gibba HOM05D000599 ORTHO05D006883 2.1e-25 119.4 98 62.2
VMungo1080G1405 Vigna mungo HOM05D000599 ORTHO05D006883 2.1e-25 119.4 98 63.3
Lsat_1_v5_gn_5_128780 Lactuca sativa HOM05D000599 ORTHO05D006883 3.6e-25 118.6 96 65.6
Ah.04g164460 Amaranthus hybridus HOM05D000599 ORTHO05D006883 4.7e-25 118.2 98 62.2
C03p47500 Brassica napus HOM05D000599 ORTHO05D006883 4.7e-25 118.2 99 59.6
BolC3t17014H Brassica oleracea HOM05D000599 ORTHO05D006883 4.7e-25 118.2 99 59.6
Carub.0003s1473 Capsella rubella HOM05D000599 ORTHO05D006883 4.7e-25 118.2 98 61.2
Phvul.005G069200 Phaseolus vulgaris HOM05D000599 ORTHO05D006883 4.7e-25 118.2 98 64.3
Zm00001eb152950 Zea mays HOM05D000599 ORTHO05D006883 6.1e-25 117.9 98 61.2
Aa31LG8G2300 Aethionema arabicum HOM05D000599 ORTHO05D006883 7.9e-25 117.5 98 60.2
BraA03t13064Z Brassica rapa HOM05D000599 ORTHO05D006883 7.9e-25 117.5 98 60.2
MD11G1257100 Malus domestica HOM05D000599 ORTHO05D006883 7.9e-25 117.5 99 61.6
EL10Ac4g08277 Beta vulgaris HOM05D000599 ORTHO05D006883 1.4e-24 116.7 98 62.2
MD03G1236200 Malus domestica HOM05D000599 ORTHO05D006883 2.3e-24 115.9 99 60.6
Thhalv10020985m.g Eutrema salsugineum HOM05D000599 ORTHO05D006883 3.0e-24 115.5 98 60.2
FAN25G3373 Fragaria x ananassa HOM05D000599 ORTHO05D006883 3.0e-24 115.5 99 61.6
AL3G27440 Arabidopsis lyrata HOM05D000599 ORTHO05D006883 3.9e-24 115.2 98 61.2
Nitab4.5_0000332g0200 Nicotiana tabacum HOM05D000599 ORTHO05D006883 5.1e-24 114.8 106 60.4
Hund22810 Selenicereus undatus HOM05D000599 ORTHO05D006883 5.1e-24 114.8 98 58.2
BraA05t22256Z Brassica rapa HOM05D000599 ORTHO05D006883 6.7e-24 114.4 98 60.2
BcaB06g29534 Brassica carinata HOM05D000599 ORTHO05D006883 8.8e-24 114.0 98 59.2
BcaC01g03898 Brassica carinata HOM05D000599 ORTHO05D006883 8.8e-24 114.0 98 58.2
C05p52130 Brassica napus HOM05D000599 ORTHO05D006883 8.8e-24 114.0 98 59.2
BolC5t33898H Brassica oleracea HOM05D000599 ORTHO05D006883 8.8e-24 114.0 98 59.2
Ca_04028_v3 Cicer arietinum L. HOM05D000599 ORTHO05D006883 8.8e-24 114.0 98 60.2
Pp3c14_1550 Physcomitrium patens HOM05D000599 ORTHO05D006883 8.8e-24 114.0 98 60.2
SMO116G0426 Selaginella moellendorffii HOM05D000599 ORTHO05D006883 8.8e-24 114.0 98 61.2
BcaC01g03893 Brassica carinata HOM05D000599 ORTHO05D006883 1.1e-23 113.6 98 58.2
AUR62019503 Chenopodium quinoa HOM05D000599 ORTHO05D006883 1.1e-23 113.6 98 59.2
AUR62036135 Chenopodium quinoa HOM05D000599 ORTHO05D006883 1.5e-23 113.2 98 59.2
Sp3g13290 Schrenkiella parvula HOM05D000599 ORTHO05D006883 1.5e-23 113.2 98 59.2
A05p34360 Brassica napus HOM05D000599 ORTHO05D006883 3.3e-23 112.1 98 59.2
SGA_v2.0_scaffold73G24221 Striga asiatica HOM05D000599 ORTHO05D006883 2.4e-21 105.9 136 48.5
Oeu025350.3 Olea europaea HOM05D000599 ORTHO05D006883 5.3e-21 104.8 150 44.0
Gohir.A01G060100 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.5e-20 103.2 83 63.9
THA.LOC104798757 Tarenaya hassleriana HOM05D000599 ORTHO05D006883 5.5e-18 94.7 102 51.0
TPR.G29650 Trifolium pratense HOM05D000599 ORTHO05D006883 2.4e-13 79.3 73 56.2
DCAR_019580 Daucus carota HOM05D000599 ORTHO05D006883 3.1e-13 79.0 73 54.8
Actinidia12546 Actinidia chinensis HOM05D000599 ORTHO05D006883 9.1e-13 77.4 83 55.4
AagrBONN_evm.TU.Sc2ySwM_368.514 Anthoceros agrestis HOM05D000599 ORTHO05D006883 2.5e-10 69.3 65 58.5
DCAR_021005 Daucus carota HOM05D000599 ORTHO05D006883 3.6e-09 65.5 65 53.8


User provided reference genes

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