Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.2e-49 199.5 102 100.0
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.4e-40 169.5 102 81.4
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 3.0e-40 168.3 102 81.4
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 4.0e-40 167.9 102 76.5
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 5.2e-40 167.5 102 75.5
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 5.2e-40 167.5 102 78.4
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 5.2e-40 167.5 102 78.4
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.2e-39 166.4 102 81.4
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 2.0e-39 165.6 102 78.4
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.6e-39 165.2 102 81.4
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 4.4e-39 164.5 102 75.5
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 9.7e-39 163.3 103 82.5
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 2.2e-38 162.2 104 79.8
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 4.8e-38 161.0 102 80.4
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.4e-37 159.5 102 80.4
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 4.1e-37 157.9 96 76.0
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.1e-37 157.9 103 75.7
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 4.1e-37 157.9 96 80.2
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 1.2e-36 156.4 104 78.8
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.6e-36 156.0 102 76.5
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.6e-36 156.0 103 77.7
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 2.0e-36 155.6 104 76.9
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 2.0e-36 155.6 103 78.6
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 2.0e-36 155.6 104 76.0
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 3.5e-36 154.8 94 83.0
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.5e-36 154.8 103 77.7
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 3.5e-36 154.8 95 84.2
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 4.5e-36 154.5 102 79.4
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 7.7e-36 153.7 102 74.5
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.7e-36 153.7 103 77.7
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 7.7e-36 153.7 95 75.8
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 7.7e-36 153.7 95 75.8
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.3e-35 152.9 102 74.5
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.3e-35 152.9 101 77.2
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.7e-35 152.5 102 77.5
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.7e-35 152.5 102 77.5
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 2.9e-35 151.8 101 72.3
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 2.9e-35 151.8 103 75.7
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.8e-35 151.4 103 72.8
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 6.5e-35 150.6 104 72.1
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 6.5e-35 150.6 101 76.2
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 8.5e-35 150.2 102 76.5
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 1.5e-34 149.4 110 72.7
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 3.2e-34 148.3 103 73.8
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 3.2e-34 148.3 96 79.2
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 4.2e-34 147.9 105 75.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 4.7e-33 144.4 108 72.2
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 4.7e-33 144.4 96 72.9
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 6.1e-33 144.1 112 68.8
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 6.1e-33 144.1 112 68.8
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 6.1e-33 144.1 97 77.3
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 6.1e-33 144.1 101 72.3
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.0e-32 143.3 93 75.3
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.3e-32 142.1 112 67.0
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 4.0e-32 141.4 107 67.3
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 2.0e-31 139.0 112 67.9
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 2.6e-31 138.7 102 71.6
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 3.4e-31 138.3 101 64.4
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.3e-30 136.3 98 69.4
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.4e-29 132.9 101 70.3
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.4e-29 132.9 101 69.3
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.4e-29 132.9 104 68.3
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.8e-29 132.5 110 66.4
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.4e-29 132.1 108 66.7
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 4.1e-29 131.3 90 73.3
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 5.4e-29 131.0 86 80.2
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 7.0e-29 130.6 106 68.9
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 9.1e-29 130.2 108 62.0
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 9.1e-29 130.2 111 66.7
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 9.1e-29 130.2 111 66.7
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 9.1e-29 130.2 114 63.2
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 1.6e-28 129.4 94 72.3
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 3.5e-28 128.3 109 67.0
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 3.5e-28 128.3 109 63.3
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 5.9e-28 127.5 103 68.0
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 5.9e-28 127.5 103 68.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 1.0e-27 126.7 112 63.4
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.0e-27 126.7 106 62.3
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.7e-27 125.9 105 60.0
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.7e-27 125.9 111 57.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 2.9e-27 125.2 118 58.5
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 1.5e-26 122.9 111 60.4
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.5e-26 122.9 88 71.6
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 1.5e-26 122.9 106 68.9
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.5e-26 122.1 113 61.9
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.5e-26 122.1 113 61.9
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 3.3e-26 121.7 114 61.4
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 5.5e-26 120.9 115 60.9
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 9.5e-26 120.2 89 69.7
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.6e-25 119.4 89 71.9
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 2.8e-25 118.6 109 59.6
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.8e-25 118.6 107 63.6
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 8.0e-25 117.1 116 56.9
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.8e-24 115.9 84 73.8
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 4.0e-24 114.8 107 61.7
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 4.0e-24 114.8 107 61.7
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.2e-23 113.2 104 59.6
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.2e-23 113.2 104 55.8
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 4.4e-23 111.3 115 57.4
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 5.7e-23 110.9 114 51.8
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 9.8e-23 110.2 112 58.9
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 9.8e-23 110.2 114 54.4
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 1.7e-22 109.4 110 58.2
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 6.3e-22 107.5 101 57.4
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.4e-21 106.3 109 56.9
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 3.1e-21 105.1 64 84.4
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 4.1e-21 104.8 105 58.1
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 5.4e-21 104.4 78 73.1
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 5.4e-21 104.4 113 54.9
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.2e-17 93.2 101 50.5
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 2.6e-15 85.5 58 67.2
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.4e-15 85.1 94 48.9
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.8e-13 79.3 70 70.0
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 5.4e-13 77.8 82 61.0
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 7.0e-13 77.4 57 73.7
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 1.3e-11 73.2 115 43.5
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.1e-10 70.1 101 45.5
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 4.7e-09 64.7 49 73.5
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 1.1e-08 63.5 104 42.3
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 2.3e-08 62.4 103 42.7
MCO12G274 Micromonas commoda HOM05D006768 ORTHO05D008436 3.4e-07 58.5 106 41.5


User provided reference genes

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