Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006099 Camellia sinensis var. sinensis HOM05D009619 ORTHO05D011745 3.9e-115 418.3 236 100.0
Rhsim03G0018800 Rhododendron simsii HOM05D009619 ORTHO05D011745 7.2e-37 158.3 141 60.3
Actinidia38553 Actinidia chinensis HOM05D009619 ORTHO05D011745 2.9e-33 146.4 177 50.8
Dinv01270 Davidia involucrata HOM05D009619 ORTHO05D011745 1.5e-29 134.0 212 42.0
TAR633G0538 Trochodendron aralioides HOM05D009619 ORTHO05D011745 4.1e-24 115.9 193 43.5
Nn2g15318 Nelumbo nucifera HOM05D009619 ORTHO05D011745 4.6e-23 112.5 184 38.0
Aqoxy1G00283 Aquilegia oxysepala HOM05D009619 ORTHO05D011745 5.0e-22 109.0 147 42.9
Nn7g36232 Nelumbo nucifera HOM05D009619 ORTHO05D011745 8.6e-22 108.2 185 38.4
GSVIVG01025247001 Vitis vinifera HOM05D009619 ORTHO05D011745 2.8e-20 103.2 150 40.0
Actinidia24532 Actinidia chinensis HOM05D009619 ORTHO05D011745 2.3e-19 100.1 245 34.7
CiPaw.14G118300 Carya illinoinensis HOM05D009619 ORTHO05D011745 4.0e-19 99.4 112 44.6
Cfa009781 Carpinus fangiana HOM05D009619 ORTHO05D011745 3.4e-18 96.3 108 44.4
Haze_23145 Corylus avellana HOM05D009619 ORTHO05D011745 2.9e-17 93.2 144 38.2
CiPaw.13G159500 Carya illinoinensis HOM05D009619 ORTHO05D011745 6.4e-17 92.0 141 36.9
Aqoxy1G00282 Aquilegia oxysepala HOM05D009619 ORTHO05D011745 8.3e-17 91.7 152 39.5
PSO017G5256 Papaver somniferum HOM05D009619 ORTHO05D011745 1.9e-16 90.5 113 37.2
COL.COLO4_06118 Corchorus olitorius HOM05D009619 ORTHO05D011745 3.2e-16 89.7 137 38.7
Thecc.09G235000 Theobroma cacao HOM05D009619 ORTHO05D011745 3.2e-16 89.7 155 36.8
QL01p004504 Quercus lobata HOM05D009619 ORTHO05D011745 9.2e-16 88.2 127 40.9
QL01p004597 Quercus lobata HOM05D009619 ORTHO05D011745 1.2e-15 87.8 127 40.2
Dinv22172 Davidia involucrata HOM05D009619 ORTHO05D011745 7.8e-15 85.1 196 32.7
MBI01_g18875_MAGBIO Magnolia biondii HOM05D009619 ORTHO05D011745 2.5e-13 80.1 150 35.3
SEGI_27779 Sequoiadendron giganteum HOM05D002054 ORTHO05D005362 5.8e-10 68.9 107 34.6
Mapoly0176s0001 Marchantia polymorpha HOM05D002054 ORTHO05D004936 7.6e-10 68.6 72 41.7
CBR_g45468 Chara braunii HOM05D002054 ORTHO05D004936 3.7e-09 66.2 80 36.2
Aqoxy7G01826 Aquilegia oxysepala HOM05D002054 ORTHO05D004936 5.4e-08 62.4 67 44.8
Medtr1g014270 Medicago truncatula HOM05D000555 ORTHO05D000646 5.4e-08 62.4 191 26.7
Pp3c7_14100 Physcomitrium patens HOM05D002054 ORTHO05D004936 7.1e-08 62.0 84 35.7
Pp3c11_12130 Physcomitrium patens HOM05D002054 ORTHO05D004936 1.6e-07 60.8 84 34.5
COL.COLO4_06117 Corchorus olitorius HOM05D009619 ORTHO05D011745 7.8e-07 58.5 160 28.1
Aa31LG3G16180 Aethionema arabicum HOM05D000555 ORTHO05D000646 1.7e-06 57.4 94 34.0
Ah.12g063070 Amaranthus hybridus HOM05D002054 ORTHO05D004936 2.3e-06 57.0 72 38.9
MBI01_g03365_MAGBIO Magnolia biondii HOM05D002054 ORTHO05D004936 2.3e-06 57.0 65 43.1
Lj1g0004939 Lotus japonicus HOM05D000555 ORTHO05D000646 3.0e-06 56.6 133 32.3
MD08G1135600 Malus domestica HOM05D002054 ORTHO05D004936 5.1e-06 55.8 58 46.6
MD15G1114600 Malus domestica HOM05D002054 ORTHO05D004936 5.1e-06 55.8 106 34.9
FvH4_2g30210 Fragaria vesca HOM05D002054 ORTHO05D004936 6.6e-06 55.5 74 37.8
FAN24G2685 Fragaria x ananassa HOM05D002054 ORTHO05D004936 6.6e-06 55.5 74 37.8
Prupe.1G466100 Prunus persica HOM05D002054 ORTHO05D004936 6.6e-06 55.5 106 34.9
SMO164G0124 Selaginella moellendorffii HOM05D002054 ORTHO05D004936 6.6e-06 55.5 109 27.5
Sabra06G0192700 Salix brachista HOM05D002054 ORTHO05D004936 8.6e-06 55.1 60 41.7


User provided reference genes

Program Settings