Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006060 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.2e-180 636.3 323 100.0
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.9e-160 569.3 296 98.6
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.5e-157 559.7 290 99.0
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 3.9e-134 481.9 296 82.1
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 6.9e-123 444.5 296 75.3
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 9.1e-123 444.1 281 79.0
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 1.2e-122 443.7 297 75.8
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 1.5e-122 443.4 295 74.6
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 5.0e-121 438.3 281 78.3
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 5.0e-121 438.3 281 78.3
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 9.4e-120 434.1 281 77.9
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 1.8e-118 429.9 281 75.4
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 5.1e-118 428.3 296 73.6
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 1.5e-117 426.8 300 71.0
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 2.0e-117 426.4 297 71.4
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 3.3e-117 425.6 296 72.3
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 1.3e-116 423.7 292 73.3
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 1.7e-116 423.3 295 70.5
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 6.3e-116 421.4 286 73.8
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 8.2e-116 421.0 298 71.1
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 1.8e-115 419.9 294 70.7
Duzib168G1434 Durio zibethinus HOM05D002816 ORTHO05D005633 6.9e-115 417.9 280 73.9
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 6.9e-115 417.9 292 71.9
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 7.7e-114 414.5 292 71.9
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 7.7e-114 414.5 292 71.9
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 1.7e-113 413.3 290 72.4
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 2.2e-113 412.9 288 70.5
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 3.8e-113 412.1 288 72.6
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 5.0e-113 411.8 290 72.1
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 5.0e-113 411.8 289 74.4
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 8.5e-113 411.0 290 71.7
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 4.2e-112 408.7 296 71.6
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 7.2e-112 407.9 296 70.3
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 1.6e-111 406.8 297 70.0
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 1.6e-111 406.8 296 69.3
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 2.7e-111 406.0 295 69.8
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 2.7e-111 406.0 296 69.3
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 3.6e-111 405.6 290 71.7
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 4.7e-111 405.2 296 67.9
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 6.1e-111 404.8 290 71.4
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 1.0e-110 404.1 281 71.9
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 1.0e-110 404.1 290 71.4
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 1.8e-110 403.3 296 69.3
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 2.3e-110 402.9 287 69.3
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 3.9e-110 402.1 281 71.9
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 3.9e-110 402.1 279 71.0
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 5.2e-110 401.7 287 71.4
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 6.7e-110 401.4 288 69.8
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 2.0e-109 399.8 281 68.7
MBI04_g14277_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 4.8e-108 395.2 281 69.0
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 4.8e-108 395.2 281 71.9
CSS0038299 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 5.3e-107 391.7 273 71.1
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 5.3e-107 391.7 281 71.2
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 1.2e-106 390.6 289 68.5
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 1.6e-106 390.2 280 69.3
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 2.0e-106 389.8 281 68.0
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 2.0e-106 389.8 292 65.4
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 3.5e-106 389.0 281 71.2
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 3.8e-105 385.6 280 69.3
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 3.8e-105 385.6 278 66.5
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 1.2e-103 380.6 289 67.1
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 8.0e-103 377.9 300 61.3
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 1.0e-102 377.5 296 65.9
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 1.8e-102 376.7 285 64.6
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 7.5e-101 371.3 295 63.7
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 1.3e-100 370.5 281 66.5
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 1.1e-99 367.5 295 62.4
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 2.4e-99 366.3 295 63.1
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 2.4e-99 366.3 295 62.7
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 7.0e-99 364.8 295 62.7
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 7.0e-99 364.8 279 62.4
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 9.1e-99 364.4 296 63.2
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 2.7e-98 362.8 291 64.6
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 5.9e-98 361.7 284 59.9
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 1.7e-97 360.1 279 60.2
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 3.2e-96 355.9 294 62.2
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 7.2e-96 354.8 282 59.6
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 1.6e-95 353.6 282 59.6
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 2.7e-95 352.8 285 60.0
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 2.7e-95 352.8 279 58.4
Lju1319A3T41 Lonicera japonica HOM05D002816 ORTHO05D005633 6.1e-95 351.7 249 71.5
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 1.0e-94 350.9 293 60.1
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 3.4e-93 345.9 293 60.1
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 3.4e-93 345.9 306 54.9
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 2.8e-92 342.8 281 58.4
MBI04_g27134_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 2.4e-91 339.7 245 67.8
Glyma.12G054833 Glycine max HOM05D002816 ORTHO05D005633 7.0e-91 338.2 283 63.6
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 1.7e-89 333.6 207 80.7
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 2.3e-89 333.2 297 59.9
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 2.5e-88 329.7 280 60.0
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 2.5e-88 329.7 272 63.2
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 1.6e-87 327.0 277 61.0
Phvul.011G056700 Phaseolus vulgaris HOM05D002816 ORTHO05D005633 7.5e-85 318.2 275 61.8
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 7.5e-85 318.2 270 61.5
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 4.9e-84 315.5 256 62.9
Lj1A364T31 Lonicera japonica HOM05D002816 ORTHO05D005633 1.1e-83 314.3 301 58.5
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 1.4e-83 313.9 259 62.5
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 4.1e-83 312.4 281 60.9
Ca_20583_v3 Cicer arietinum L. HOM05D002816 ORTHO05D005633 5.4e-83 312.0 260 62.7
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 9.2e-83 311.2 291 56.0
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 1.2e-82 310.8 293 52.6
Actinidia06323 Actinidia chinensis HOM05D002816 ORTHO05D005633 7.8e-82 308.1 317 57.1
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 1.5e-80 303.9 293 54.3
Actinidia39381 Actinidia chinensis HOM05D002816 ORTHO05D005633 2.3e-57 226.9 130 86.9
SEGI_13421 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 2.4e-51 206.8 321 39.3
SEGI_08878 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 7.8e-50 201.8 320 39.7
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 7.8e-50 201.8 320 39.7
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 5.8e-45 185.7 282 38.3
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 2.1e-39 167.2 279 37.6
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 7.6e-37 158.7 326 34.0
AagrBONN_evm.TU.Sc2ySwM_344.2597 Anthoceros agrestis HOM05D002816 ORTHO05D005633 1.1e-35 154.8 351 31.9
Psat6g019120 Pisum sativum HOM05D002816 ORTHO05D005633 1.2e-34 151.4 96 72.9
AagrBONN_evm.TU.Sc2ySwM_344.2583 Anthoceros agrestis HOM05D002816 ORTHO05D005633 3.1e-30 136.7 339 31.3
CAN.G179.1 Capsicum annuum HOM05D002816 ORTHO05D005633 2.5e-24 117.1 83 71.1
Mapoly0023s0010 Marchantia polymorpha HOM05D002816 ORTHO05D005633 1.1e-22 111.7 231 33.8
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 5.1e-17 92.8 120 41.7
ECA233G1205 Erigeron canadensis HOM05D002816 ORTHO05D005633 4.1e-14 83.2 61 68.9
Actinidia39380 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.6e-10 71.2 65 61.5
PSO339G1112 Papaver somniferum HOM05D002816 ORTHO05D005633 2.2e-07 60.8 44 65.9


User provided reference genes

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