Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006031 Camellia sinensis var. sinensis HOM05D007745 ORTHO05D009771 4.6e-138 494.6 253 100.0
CSS0048958 Camellia sinensis var. sinensis HOM05D007745 ORTHO05D009771 4.2e-123 444.9 314 77.4
Rhsim06G0036400 Rhododendron simsii HOM05D007745 ORTHO05D009771 2.2e-55 219.9 272 52.6
Actinidia22565 Actinidia chinensis HOM05D007745 ORTHO05D009771 1.6e-50 203.8 261 51.0
vmacro21613 Vaccinium macrocarpon HOM05D007745 ORTHO05D009771 1.1e-46 191.0 277 48.7
Dinv36046 Davidia involucrata HOM05D007745 ORTHO05D009771 7.8e-45 184.9 287 45.6
CSS0036766 Camellia sinensis var. sinensis HOM05D007745 ORTHO05D009771 9.5e-43 177.9 228 53.9
Hma1.2p1_0203F.1_g086690 Hydrangea macrophylla HOM05D007745 ORTHO05D009771 2.3e-36 156.8 270 43.3
Dinv39385 Davidia involucrata HOM05D000626 ORTHO05D000824 1.2e-34 151.0 194 49.5
GSVIVG01009651001 Vitis vinifera HOM05D007745 ORTHO05D009771 5.2e-33 145.6 285 41.1
Lj4A44T41 Lonicera japonica HOM05D007745 ORTHO05D009771 7.5e-32 141.7 272 39.3
TAR628G0088 Trochodendron aralioides HOM05D007745 ORTHO05D009771 4.7e-26 122.5 272 38.6
Oeu015593.1 Olea europaea HOM05D007745 ORTHO05D009771 2.9e-23 113.2 272 37.5
Haze_17626 Corylus avellana HOM05D007745 ORTHO05D009771 1.4e-22 110.9 280 36.1
Sabra14G0030100 Salix brachista HOM05D007745 ORTHO05D009771 1.4e-22 110.9 282 33.0
Manes.05G163200 Manihot esculenta HOM05D007745 ORTHO05D009771 1.9e-22 110.5 286 36.0
Ciclev10001389m.g Citrus clementina HOM05D007745 ORTHO05D009771 5.4e-22 109.0 294 34.4
Cc10_g03330 Coffea canephora HOM05D007745 ORTHO05D009771 1.2e-21 107.8 263 34.2
Potri.014G041300 Populus trichocarpa HOM05D007745 ORTHO05D009771 3.9e-20 102.8 278 33.5
MSTRG.24305 Avicennia marina HOM05D007745 ORTHO05D009771 8.6e-20 101.7 288 33.3
CiPaw.16G054300 Carya illinoinensis HOM05D007745 ORTHO05D009771 1.2e-18 97.8 284 32.7
FvH4_2g40240 Fragaria vesca HOM05D007745 ORTHO05D009771 1.6e-18 97.4 271 36.2
FAN15G0796 Fragaria x ananassa HOM05D007745 ORTHO05D009771 1.6e-18 97.4 269 35.3
FAN20G1509 Fragaria x ananassa HOM05D007745 ORTHO05D009771 2.8e-18 96.7 270 35.9
ECA247G2825 Erigeron canadensis HOM05D000121 ORTHO05D001726 3.6e-18 96.3 196 37.2
Cfa018439 Carpinus fangiana HOM05D007745 ORTHO05D009771 5.2e-17 92.4 281 35.2
FAN27G0058 Fragaria x ananassa HOM05D007745 ORTHO05D009771 8.9e-17 91.7 271 35.1
Prupe.1G383200 Prunus persica HOM05D007745 ORTHO05D009771 1.2e-16 91.3 278 32.7
Thecc.08G022500 Theobroma cacao HOM05D007745 ORTHO05D009771 3.4e-16 89.7 275 35.3
Gohir.D06G009200 Gossypium hirsutum HOM05D007745 ORTHO05D009771 4.4e-16 89.4 286 29.7
Duzib041G0319 Durio zibethinus HOM05D007745 ORTHO05D009771 9.9e-16 88.2 290 32.4
Nn5g29499 Nelumbo nucifera HOM05D007745 ORTHO05D009771 1.7e-15 87.4 294 31.3
QL02p007506 Quercus lobata HOM05D007745 ORTHO05D009771 8.4e-15 85.1 279 34.1
Sc02g0006490 Simmondsia chinensis HOM05D007745 ORTHO05D009771 1.1e-14 84.7 274 29.9
CANSAT25G3090 Cannabis sativa HOM05D007745 ORTHO05D009771 1.4e-14 84.3 275 32.7
Gorai.010G012000 Gossypium raimondii HOM05D007745 ORTHO05D009771 1.9e-14 84.0 286 29.0
Nitab4.5_0000110g0250 Nicotiana tabacum HOM05D007745 ORTHO05D009771 4.1e-14 82.8 290 31.0
Gohir.A06G011800 Gossypium hirsutum HOM05D007745 ORTHO05D009771 3.5e-13 79.7 286 29.0
COL.COLO4_26369 Corchorus olitorius HOM05D007745 ORTHO05D009771 4.6e-13 79.3 167 35.9
DCAR_012752 Daucus carota HOM05D007745 ORTHO05D009771 6.0e-13 79.0 179 36.3
RcHm_v2.0_Chr6g0300521 Rosa chinensis HOM05D007745 ORTHO05D009771 6.0e-13 79.0 276 31.9
PGSC0003DMG400027855 Solanum tuberosum HOM05D007745 ORTHO05D009771 6.0e-13 79.0 270 29.6
Nitab4.5_0010511g0010 Nicotiana tabacum HOM05D007745 ORTHO05D009771 7.8e-13 78.6 294 30.3
MSTRG.22294 Avicennia marina HOM05D007745 ORTHO05D009771 6.6e-12 75.5 287 28.6
Nn1g05100 Nelumbo nucifera HOM05D000010 ORTHO05D009771 8.7e-12 75.1 159 35.8
Eucgr.A00494 Eucalyptus grandis HOM05D007745 ORTHO05D009771 1.9e-11 73.9 272 29.0
HanXRQChr04g0104891 Helianthus annuus HOM05D007745 ORTHO05D009771 1.9e-11 73.9 264 30.3
PGR031G1654 Punica granatum HOM05D007745 ORTHO05D009771 2.5e-11 73.6 277 31.0
HanXRQChr02g0038991 Helianthus annuus HOM05D007745 ORTHO05D009771 2.1e-10 70.5 186 34.9
Gohir.D05G199500 Gossypium hirsutum HOM05D007745 ORTHO05D009771 2.8e-10 70.1 268 29.5
Peaxi162Scf00057g00084 Petunia axillaris HOM05D007745 ORTHO05D009771 2.8e-10 70.1 241 30.3
MELO3C010923.2 Cucumis melo HOM05D007745 ORTHO05D009771 3.6e-10 69.7 263 30.0
Duzib093G2234 Durio zibethinus HOM05D007745 ORTHO05D009771 8.1e-10 68.6 292 29.1
Gohir.A05G196400 Gossypium hirsutum HOM05D007745 ORTHO05D009771 1.4e-09 67.8 264 30.3
HanXRQChr02g0038981 Helianthus annuus HOM05D007745 ORTHO05D009771 3.1e-09 66.6 174 32.2
HanXRQChr04g0104881 Helianthus annuus HOM05D007745 ORTHO05D009771 2.0e-08 63.9 265 29.1
Gorai.009G204700 Gossypium raimondii HOM05D007745 ORTHO05D009771 2.6e-08 63.5 264 27.7
CsaV3_2G028480 Cucumis sativus L. HOM05D007745 ORTHO05D009771 3.4e-08 63.2 293 28.7
PSO675G1126 Papaver somniferum HOM05D007745 ORTHO05D009771 3.4e-08 63.2 160 33.8
CAN.G1126.17 Capsicum annuum HOM05D007745 ORTHO05D009771 5.8e-08 62.4 274 28.8
MD15G1032200 Malus domestica HOM05D007745 ORTHO05D009771 5.8e-08 62.4 277 29.6
HanXRQChr09g0268481 Helianthus annuus HOM05D007745 ORTHO05D009771 1.3e-07 61.2 193 29.5
PSO541G3078 Papaver somniferum HOM05D007745 ORTHO05D009771 1.3e-07 61.2 273 26.7
MBI16_g33266_MAGBIO Magnolia biondii HOM05D007745 ORTHO05D009771 2.2e-07 60.5 281 28.5
ClCG08G015320 Citrullus lanatus HOM05D007745 ORTHO05D009771 2.9e-07 60.1 193 30.6
SalBow8G3493 Salvia bowleyana HOM05D007745 ORTHO05D009771 6.4e-07 58.9 213 28.2
SalBow8G4556 Salvia bowleyana HOM05D007745 ORTHO05D009771 6.4e-07 58.9 213 28.2
Lsat_1_v5_gn_1_18141 Lactuca sativa HOM05D007745 ORTHO05D009771 8.4e-07 58.5 82 40.2
HanXRQChr16g0508531 Helianthus annuus HOM05D007745 ORTHO05D009771 5.4e-06 55.8 125 37.6
Sed0012259 Sechium edule HOM05D007745 ORTHO05D009771 9.3e-06 55.1 270 28.5


User provided reference genes

Program Settings