Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005966 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 1.7e-154 549.3 271 100.0
CSS0015891 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 7.6e-131 470.7 280 87.1
CSS0035751 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 1.4e-105 386.7 241 83.0
CSS0049777 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 3.2e-97 359.0 244 77.0
CSS0012376 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 4.8e-93 345.1 295 66.8
CSS0030635 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 4.2e-81 305.4 228 71.9
vmacro05920 Vaccinium macrocarpon HOM05D004846 ORTHO05D005630 4.4e-70 268.9 251 59.0
Rhsim10G0011500 Rhododendron simsii HOM05D004846 ORTHO05D005630 6.3e-69 265.0 225 63.6
Dinv25698 Davidia involucrata HOM05D004846 ORTHO05D005630 5.9e-67 258.5 226 61.5
Actinidia05946 Actinidia chinensis HOM05D004846 ORTHO05D005630 7.7e-67 258.1 226 61.5
Sabra16G0218700 Salix brachista HOM05D004846 ORTHO05D005630 4.0e-63 245.7 261 51.3
GSVIVG01027213001 Vitis vinifera HOM05D004846 ORTHO05D005630 2.0e-62 243.4 226 57.5
Atru.chr6.2483 Acer truncatum HOM05D004846 ORTHO05D005630 2.8e-61 239.6 229 55.0
Dinv00597 Davidia involucrata HOM05D004846 ORTHO05D005630 4.8e-61 238.8 225 57.8
Potri.001G338000 Populus trichocarpa HOM05D004846 ORTHO05D005630 3.1e-60 236.1 261 50.2
Manes.15G092600 Manihot esculenta HOM05D004846 ORTHO05D005630 4.1e-60 235.7 255 52.2
Thecc.04G024900 Theobroma cacao HOM05D004846 ORTHO05D005630 4.1e-60 235.7 226 55.3
Duzib187G0011 Durio zibethinus HOM05D004846 ORTHO05D005630 2.0e-59 233.4 255 51.0
Gohir.D10G085400 Gossypium hirsutum HOM05D004846 ORTHO05D005630 3.5e-59 232.6 255 51.0
Hma1.2p1_0279F.1_g112220 Hydrangea macrophylla HOM05D004846 ORTHO05D005630 3.5e-59 232.6 223 57.8
TAR371G0224 Trochodendron aralioides HOM05D004846 ORTHO05D005630 3.5e-59 232.6 224 56.2
Cpa.g.sc130.45 Carica papaya HOM05D004846 ORTHO05D005630 7.7e-59 231.5 229 55.9
CANSAT64G0871 Cannabis sativa HOM05D004846 ORTHO05D005630 1.0e-58 231.1 246 52.0
Gorai.011G093300 Gossypium raimondii HOM05D004846 ORTHO05D005630 1.0e-58 231.1 255 50.6
Eucgr.J02281 Eucalyptus grandis HOM05D004846 ORTHO05D005630 1.7e-58 230.3 226 55.3
CiPaw.03G050100 Carya illinoinensis HOM05D004846 ORTHO05D005630 2.9e-58 229.6 228 54.4
Peaxi162Scf00420g00255 Petunia axillaris HOM05D004846 ORTHO05D005630 5.0e-58 228.8 251 51.8
Haze_14810 Corylus avellana HOM05D004846 ORTHO05D005630 8.6e-58 228.0 223 54.7
MD17G1018500 Malus domestica HOM05D004846 ORTHO05D005630 1.1e-57 227.6 252 50.4
Ciclev10014098m.g Citrus clementina HOM05D004846 ORTHO05D005630 1.5e-57 227.3 229 52.4
QL02p072992 Quercus lobata HOM05D004846 ORTHO05D005630 1.9e-57 226.9 223 55.2
Glyma.16G063300 Glycine max HOM05D004846 ORTHO05D005630 2.5e-57 226.5 223 53.8
Gohir.A10G160700 Gossypium hirsutum HOM05D004846 ORTHO05D005630 4.2e-57 225.7 255 49.0
DCAR_013672 Daucus carota HOM05D004846 ORTHO05D005630 5.5e-57 225.3 224 55.8
Lj1g0007607 Lotus japonicus HOM05D004846 ORTHO05D005630 5.5e-57 225.3 225 55.1
SalBow2G2965 Salvia bowleyana HOM05D004846 ORTHO05D005630 5.5e-57 225.3 222 55.0
Cfa007283 Carpinus fangiana HOM05D004846 ORTHO05D005630 7.2e-57 224.9 223 54.3
Nitab4.5_0001863g0210 Nicotiana tabacum HOM05D004846 ORTHO05D005630 7.2e-57 224.9 261 49.8
Prupe.3G299200 Prunus persica HOM05D004846 ORTHO05D005630 1.2e-56 224.2 252 50.8
COL.COLO4_29272 Corchorus olitorius HOM05D004846 ORTHO05D005630 2.1e-56 223.4 226 53.5
PGR083G2372 Punica granatum HOM05D004846 ORTHO05D005630 2.1e-56 223.4 226 54.4
Phvul.008G148206 Phaseolus vulgaris HOM05D004846 ORTHO05D005630 2.8e-56 223.0 226 54.4
Medtr7g037280 Medicago truncatula HOM05D004846 ORTHO05D005630 3.6e-56 222.6 225 54.2
TWI15G0720 Tripterygium wilfordii HOM05D004846 ORTHO05D005630 3.6e-56 222.6 225 53.3
CsaV3_3G046520 Cucumis sativus L. HOM05D004846 ORTHO05D005630 4.7e-56 222.2 217 55.3
FvH4_6g52480 Fragaria vesca HOM05D004846 ORTHO05D005630 4.7e-56 222.2 248 50.0
CAN.G473.55 Capsicum annuum HOM05D004846 ORTHO05D005630 6.1e-56 221.9 226 54.4
ECA233G5463 Erigeron canadensis HOM05D004846 ORTHO05D005630 6.1e-56 221.9 226 54.9
FAN09G4064 Fragaria x ananassa HOM05D004846 ORTHO05D005630 6.1e-56 221.9 248 50.0
MD09G1017700 Malus domestica HOM05D004846 ORTHO05D005630 6.1e-56 221.9 252 49.2
Nn7g36106 Nelumbo nucifera HOM05D004846 ORTHO05D005630 6.1e-56 221.9 224 54.5
Psat3g169160 Pisum sativum HOM05D004846 ORTHO05D005630 6.1e-56 221.9 247 51.0
Glyma.19G082100 Glycine max HOM05D004846 ORTHO05D005630 8.0e-56 221.5 223 53.8
FAN05G3122 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.0e-55 221.1 248 49.6
Lj3C906G17 Lonicera japonica HOM05D004846 ORTHO05D005630 1.0e-55 221.1 224 54.5
Solyc02g093770.3 Solanum lycopersicum HOM05D004846 ORTHO05D005630 1.0e-55 221.1 224 54.0
Lalb_Chr24g0403411 Lupinus albus HOM05D004846 ORTHO05D005630 1.4e-55 220.7 226 54.4
Sopen02g038410 Solanum pennellii HOM05D004846 ORTHO05D005630 1.4e-55 220.7 224 54.0
PGSC0003DMG402020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 1.4e-55 220.7 224 54.5
PGSC0003DMG403020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 1.4e-55 220.7 224 54.5
TPR.G9064 Trifolium pratense HOM05D004846 ORTHO05D005630 1.8e-55 220.3 226 53.5
VMungo1127G0826 Vigna mungo HOM05D004846 ORTHO05D005630 2.3e-55 219.9 223 53.8
FAN14G2722 Fragaria x ananassa HOM05D004846 ORTHO05D005630 4.0e-55 219.2 248 49.6
Lsat_1_v5_gn_5_21981 Lactuca sativa HOM05D004846 ORTHO05D005630 4.0e-55 219.2 221 54.3
RcHm_v2.0_Chr2g0174121 Rosa chinensis HOM05D004846 ORTHO05D005630 4.0e-55 219.2 220 54.5
FAN02G3962 Fragaria x ananassa HOM05D004846 ORTHO05D005630 8.9e-55 218.0 248 49.2
ATR0751G144 Amborella trichopoda HOM05D004846 ORTHO05D005630 1.2e-54 217.6 219 54.3
Oeu062399.1 Olea europaea HOM05D004846 ORTHO05D005630 1.2e-54 217.6 221 54.3
PSO210G2073 Papaver somniferum HOM05D004846 ORTHO05D005630 1.2e-54 217.6 223 51.6
HanXRQChr07g0193151 Helianthus annuus HOM05D004846 ORTHO05D005630 1.5e-54 217.2 221 52.5
SGA_v2.0_scaffold66G22277 Striga asiatica HOM05D004846 ORTHO05D005630 1.5e-54 217.2 221 55.2
ClCG05G017040 Citrullus lanatus HOM05D004846 ORTHO05D005630 2.0e-54 216.9 216 55.6
Sc09g0010530 Simmondsia chinensis HOM05D004846 ORTHO05D005630 2.0e-54 216.9 226 51.8
MELO3C003688.2 Cucumis melo HOM05D004846 ORTHO05D005630 3.4e-54 216.1 216 54.6
BcaC06g31008 Brassica carinata HOM05D004846 ORTHO05D005630 4.4e-54 215.7 223 53.8
Cc07_g00370 Coffea canephora HOM05D004846 ORTHO05D005630 9.8e-54 214.5 223 54.3
Sed0014062 Sechium edule HOM05D004846 ORTHO05D005630 2.2e-53 213.4 216 55.1
Migut.H00055 Erythranthe guttata HOM05D004846 ORTHO05D005630 2.8e-53 213.0 256 50.0
arahy.Tifrunner.gnm1.ann1.EI4BFE Arachis hypogaea HOM05D004846 ORTHO05D005630 3.7e-53 212.6 223 51.1
SGA_v2.0_scaffold135G34938 Striga asiatica HOM05D004846 ORTHO05D005630 4.9e-53 212.2 221 54.8
Sed0008655 Sechium edule HOM05D004846 ORTHO05D005630 6.3e-53 211.8 216 54.2
arahy.Tifrunner.gnm1.ann1.QFX8QT Arachis hypogaea HOM05D004846 ORTHO05D005630 8.3e-53 211.5 223 50.7
A06p41290 Brassica napus HOM05D004846 ORTHO05D005630 8.3e-53 211.5 223 52.9
BraA06t27054Z Brassica rapa HOM05D004846 ORTHO05D005630 8.3e-53 211.5 223 52.9
HanXRQChr02g0054051 Helianthus annuus HOM05D004846 ORTHO05D005630 8.3e-53 211.5 226 52.7
EL10Ac2g04126 Beta vulgaris HOM05D004846 ORTHO05D005630 1.4e-52 210.7 220 52.7
PSO210G2938 Papaver somniferum HOM05D004846 ORTHO05D005630 1.4e-52 210.7 223 50.2
Hund19592 Selenicereus undatus HOM05D004846 ORTHO05D005630 1.4e-52 210.7 226 50.4
HPP92_021915 Vanilla planifolia HOM05D004846 ORTHO05D005630 1.4e-52 210.7 263 47.5
Aa31LG2G5360 Aethionema arabicum HOM05D004846 ORTHO05D005630 1.8e-52 210.3 221 52.5
THA.LOC104805347 Tarenaya hassleriana HOM05D004846 ORTHO05D005630 1.8e-52 210.3 219 51.6
Zm00001eb308720 Zea mays HOM05D004846 ORTHO05D005630 2.4e-52 209.9 250 46.4
BcaC06g33832 Brassica carinata HOM05D004846 ORTHO05D005630 4.1e-52 209.1 250 49.2
C07p36370 Brassica napus HOM05D004846 ORTHO05D005630 4.1e-52 209.1 250 49.2
BolC7t44153H Brassica oleracea HOM05D004846 ORTHO05D005630 4.1e-52 209.1 250 49.2
MBI15_g38527_MAGBIO Magnolia biondii HOM05D004846 ORTHO05D005630 1.2e-51 207.6 226 49.6
MSTRG.24063 Avicennia marina HOM05D004846 ORTHO05D005630 1.6e-51 207.2 222 51.4
Thhalv10003555m.g Eutrema salsugineum HOM05D004846 ORTHO05D005630 1.6e-51 207.2 227 50.7
AUR62031596 Chenopodium quinoa HOM05D004846 ORTHO05D005630 2.0e-51 206.8 216 53.7
Carub.0005s0560 Capsella rubella HOM05D004846 ORTHO05D005630 4.5e-51 205.7 262 46.9
AT3G27325 Arabidopsis thaliana HOM05D004846 ORTHO05D005630 5.9e-51 205.3 235 51.1
Sp2g16490 Schrenkiella parvula HOM05D004846 ORTHO05D005630 1.3e-50 204.1 229 49.8
AUR62012470 Chenopodium quinoa HOM05D004846 ORTHO05D005630 2.3e-50 203.4 216 52.8
AL5G16590 Arabidopsis lyrata HOM05D004846 ORTHO05D005630 3.8e-50 202.6 269 46.1
CARHR040910 Cardamine hirsuta HOM05D004846 ORTHO05D005630 1.5e-49 200.7 250 47.6
C02p54070 Brassica napus HOM05D004846 ORTHO05D005630 4.3e-49 199.1 215 51.6
BolC2t11469H Brassica oleracea HOM05D004846 ORTHO05D005630 4.3e-49 199.1 215 51.6
Gohir.A09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 9.5e-49 198.0 214 50.0
SEGI_08787 Sequoiadendron giganteum HOM05D004846 ORTHO05D005630 2.8e-48 196.4 256 44.1
Gohir.D09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 6.1e-48 195.3 214 49.5
Gorai.006G037800 Gossypium raimondii HOM05D004846 ORTHO05D005630 6.1e-48 195.3 214 49.5
A02p35330 Brassica napus HOM05D004846 ORTHO05D005630 1.0e-47 194.5 217 50.2
BraA02t08536Z Brassica rapa HOM05D004846 ORTHO05D005630 1.0e-47 194.5 217 50.2
Ah.10g035510 Amaranthus hybridus HOM05D004846 ORTHO05D005630 1.8e-47 193.7 221 49.8
Os09g0266400 Oryza sativa ssp. japonica HOM05D004846 ORTHO05D005630 1.8e-47 193.7 250 43.6
Mapoly0133s0025 Marchantia polymorpha HOM05D004846 ORTHO05D005630 1.2e-38 164.5 217 43.8
CDE02G2253 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 6.0e-35 152.1 225 43.1
AagrBONN_evm.TU.Sc2ySwM_228.569 Anthoceros agrestis HOM05D004846 ORTHO05D005630 1.9e-33 147.1 228 36.4
Pp3c12_23520 Physcomitrium patens HOM05D004846 ORTHO05D005630 9.5e-33 144.8 209 40.7
Pp3c14_5780 Physcomitrium patens HOM05D004846 ORTHO05D005630 3.1e-31 139.8 245 36.3
SMO119G0307 Selaginella moellendorffii HOM05D004846 ORTHO05D005630 6.8e-31 138.7 203 41.4
Pp3c3_36830 Physcomitrium patens HOM05D004846 ORTHO05D005630 2.0e-30 137.1 207 38.2
CBR_g922 Chara braunii HOM05D004846 ORTHO05D005630 2.6e-22 110.2 210 34.8
CDE01G0149 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 6.0e-19 99.0 216 33.8
unitig_1.g29345 Utricularia gibba HOM05D004846 ORTHO05D005630 4.4e-14 82.8 109 45.9
unitig_747.g22069 Utricularia gibba HOM05D004846 ORTHO05D005630 4.4e-14 82.8 109 45.9
HanXRQChr02g0047501 Helianthus annuus HOM05D004846 ORTHO05D005630 1.0e-10 71.6 91 48.4
CSS0003755 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 1.6e-08 64.3 35 88.6
CSS0012369 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 4.8e-08 62.8 35 85.7
CSS0025976 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 4.8e-08 62.8 35 85.7
CSS0029627 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 4.8e-08 62.8 35 85.7
CSS0035603 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 4.8e-08 62.8 35 85.7
CSS0050182 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 3.4e-06 56.6 35 80.0


User provided reference genes

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