Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.6e-46 188.3 95 100.0
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 5.7e-41 170.6 110 83.6
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 3.7e-40 167.9 95 89.5
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.1e-39 166.4 93 89.2
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 4.1e-39 164.5 95 88.4
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 2.6e-38 161.8 93 88.2
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.2e-37 158.7 95 86.3
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 2.9e-37 158.3 95 86.3
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 5.0e-37 157.5 95 85.3
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 5.0e-37 157.5 95 86.3
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 5.0e-37 157.5 96 85.4
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 1.1e-36 156.4 93 84.9
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.1e-36 156.4 95 84.2
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.4e-36 156.0 95 84.2
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 2.5e-36 155.2 93 86.0
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 2.5e-36 155.2 92 82.6
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 7.2e-36 153.7 94 85.1
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.2e-35 152.9 90 86.7
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.2e-35 152.9 93 82.8
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.6e-35 152.5 95 83.2
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.6e-35 152.5 95 80.0
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 1.6e-35 152.5 93 81.7
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.6e-35 152.5 95 81.1
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.1e-35 152.1 96 82.3
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 2.1e-35 152.1 89 85.4
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 3.6e-35 151.4 84 90.5
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 3.6e-35 151.4 95 81.1
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 4.7e-35 151.0 95 84.2
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 6.1e-35 150.6 97 82.5
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 7.9e-35 150.2 95 80.0
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 7.9e-35 150.2 83 89.2
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.4e-34 149.4 91 84.6
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.8e-34 149.1 95 80.0
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.8e-34 149.1 95 80.0
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 2.3e-34 148.7 95 77.9
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.3e-34 148.7 113 71.7
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 3.0e-34 148.3 96 79.2
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 3.0e-34 148.3 95 83.2
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 3.9e-34 147.9 94 81.9
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.7e-34 147.1 95 82.1
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.7e-34 147.1 94 83.0
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.7e-34 147.1 89 83.1
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 6.7e-34 147.1 90 83.3
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.1e-33 146.4 91 79.1
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.1e-33 146.4 91 79.1
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 1.1e-33 146.4 94 80.9
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.1e-33 146.4 83 86.7
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 1.5e-33 146.0 95 82.1
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 2.0e-33 145.6 83 83.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 2.0e-33 145.6 83 90.4
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 2.6e-33 145.2 90 81.1
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 3.3e-33 144.8 86 84.9
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 4.4e-33 144.4 93 78.5
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 9.7e-33 143.3 83 85.5
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 9.7e-33 143.3 93 78.5
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 9.7e-33 143.3 82 85.4
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 9.7e-33 143.3 82 85.4
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 9.7e-33 143.3 86 81.4
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.2e-32 142.1 83 83.1
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 3.7e-32 141.4 86 80.2
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.7e-32 141.4 89 77.5
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 3.7e-32 141.4 94 76.6
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 3.7e-32 141.4 82 85.4
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 4.8e-32 141.0 89 78.7
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.8e-32 141.0 91 76.9
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 4.8e-32 141.0 119 65.5
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 6.3e-32 140.6 77 89.6
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 8.2e-32 140.2 81 87.7
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 1.8e-31 139.0 84 82.1
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.8e-31 139.0 94 73.4
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.8e-31 139.0 94 73.4
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.8e-31 139.0 90 75.6
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 1.8e-31 139.0 80 81.2
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.8e-31 139.0 94 75.5
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 2.4e-31 138.7 87 79.3
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 3.1e-31 138.3 99 72.7
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 3.1e-31 138.3 86 83.7
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 3.1e-31 138.3 79 82.3
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 3.1e-31 138.3 81 84.0
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 3.1e-31 138.3 81 86.4
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.1e-31 137.9 94 74.5
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 4.1e-31 137.9 84 81.0
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 5.3e-31 137.5 84 79.8
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 9.1e-31 136.7 94 75.5
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.6e-30 136.0 82 81.7
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 2.0e-30 135.6 91 73.6
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 2.0e-30 135.6 91 73.6
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 2.0e-30 135.6 91 73.6
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 2.6e-30 135.2 80 82.5
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 5.9e-30 134.0 91 73.6
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 7.7e-30 133.7 84 78.6
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.0e-29 133.3 95 69.5
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 1.3e-29 132.9 95 69.5
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.3e-29 132.9 88 72.7
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-29 132.5 95 69.5
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-29 132.5 95 69.5
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.7e-29 132.5 95 69.5
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.7e-29 132.5 95 69.5
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.2e-29 132.1 82 79.3
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.2e-29 132.1 91 72.5
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 2.9e-29 131.7 82 79.3
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.9e-29 131.7 104 69.2
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 3.8e-29 131.3 78 85.9
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 5.0e-29 131.0 82 80.5
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 5.0e-29 131.0 86 80.2
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.5e-28 129.4 81 84.0
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 1.9e-28 129.0 83 77.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.9e-28 129.0 79 82.3
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 5.5e-28 127.5 78 76.9
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 9.4e-28 126.7 80 82.5
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 9.4e-28 126.7 79 84.8
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.6e-27 125.9 84 81.0
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.1e-27 125.6 91 69.2
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 4.0e-26 121.3 66 89.4
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.5e-25 119.4 71 76.1
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 2.2e-24 115.5 66 81.8
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 8.2e-24 113.6 62 87.1
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 2.0e-22 109.0 93 67.7
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 3.5e-22 108.2 70 74.3
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-20 102.8 90 61.1
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.2e-17 93.2 74 67.6
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 2.4e-15 85.5 83 51.8
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 2.4e-15 85.5 55 80.0
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 7.0e-15 84.0 47 85.1
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.6e-14 82.8 63 58.7
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.0e-14 82.4 60 66.7
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 2.8e-11 72.0 49 67.3
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 8.0e-11 70.5 62 58.1
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-08 62.8 48 62.5
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-08 62.8 48 62.5
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-08 62.8 48 62.5


User provided reference genes

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