Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005903 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 8.4e-48 193.4 97 100.0
CSS0004716 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 4.6e-38 161.0 96 85.4
CSS0042954 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 4.0e-34 147.9 125 65.6
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.9e-10 67.4 56 64.3
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.9e-10 67.4 56 64.3
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.9e-10 67.4 56 64.3
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.9e-10 67.4 56 64.3
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.4e-09 65.1 62 62.9
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.5e-09 64.7 62 61.3
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.9e-09 64.3 56 62.5
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.2e-08 62.4 53 64.2
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.2e-08 62.4 62 58.1
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 2.2e-08 62.4 68 52.9
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.8e-08 61.6 62 58.1
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.9e-07 59.3 49 65.3
Cc00_g33710 Coffea canephora HOM05D029954 ORTHO05D022123 2.5e-07 58.9 81 42.0
Rhsim11G0089400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.5e-07 58.9 64 54.7
COL.COLO4_04631 Corchorus olitorius HOM05D007230 ORTHO05D022123 7.2e-07 57.4 59 50.8
Rhsim06G0147600 Rhododendron simsii HOM05D007230 ORTHO05D022123 7.2e-07 57.4 62 56.5
CSS0015235 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 2.7e-06 55.5 49 65.3
CSS0045907 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 2.7e-06 55.5 49 65.3


User provided reference genes

Program Settings