Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005869 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 7.9e-57 223.4 102 100.0
CSS0045379 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.0e-44 182.2 102 78.4
CSS0031335 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.0e-43 179.9 102 81.4
CSS0024732 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 6.1e-33 144.1 102 62.7
CSS0025359 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.0e-32 143.3 102 62.7
CSS0046961 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 7.2e-26 120.6 102 57.8
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.1e-25 117.5 82 64.6
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-23 113.2 58 81.0
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 2.0e-23 112.5 94 43.6
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-22 109.0 95 45.3
CSS0005179 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.8e-22 108.6 96 44.8
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-22 108.6 95 45.3
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-20 102.4 89 44.9
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-19 98.2 95 41.1
CSS0034649 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 6.6e-19 97.4 87 43.7
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-18 95.1 95 37.9
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-17 93.2 95 41.1
CSS0016353 Camellia sinensis var. sinensis HOM05D002203 ORTHO05D013815 2.3e-16 89.0 100 39.0
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-13 79.7 97 35.1
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.0e-12 75.9 75 38.7
Atru.chr13.2301 Acer truncatum HOM05D000003 ORTHO05D002259 4.6e-12 74.7 98 33.7
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-11 73.6 98 33.7
CSS0024939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-11 73.2 94 35.1
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-11 72.4 83 34.9
CSS0044712 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-11 72.4 62 45.2
Rhsim12G0011400 Rhododendron simsii HOM05D012301 ORTHO05D013815 6.6e-11 70.9 70 37.1
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 8.6e-11 70.5 91 30.8
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-10 68.6 97 32.0
Atru.chr11.1073 Acer truncatum HOM05D000003 ORTHO05D002259 4.3e-10 68.2 94 30.9
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-10 67.4 97 33.0
Atru.chr7.96 Acer truncatum HOM05D000003 ORTHO05D002259 7.3e-10 67.4 82 32.9
CSS0021010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-10 67.0 66 42.4
CSS0022483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-10 67.0 55 45.5
CSS0039930 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-10 67.0 55 45.5
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 66.6 92 33.7
Atru.chr1.3846 Acer truncatum HOM05D000003 ORTHO05D002259 1.6e-09 66.2 94 31.9
Atru.chr5.2369 Acer truncatum HOM05D000003 ORTHO05D002259 6.2e-09 64.3 95 33.7
CSS0026307 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.2e-09 64.3 55 43.6
Atru.chr8.877 Acer truncatum HOM05D000003 ORTHO05D002259 1.1e-08 63.5 98 31.6
Atru.chr12.2307 Acer truncatum HOM05D000003 ORTHO05D002259 1.4e-08 63.2 98 29.6
Atru.chr11.1160 Acer truncatum HOM05D000003 ORTHO05D002259 1.8e-08 62.8 95 29.5
Atru.chr6.296 Acer truncatum HOM05D000003 ORTHO05D002259 2.3e-08 62.4 97 33.0
CSS0010072 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.3e-08 62.4 48 56.2
Glyma.05G143850 Glycine max HOM05D013446 ORTHO05D017041 2.3e-08 62.4 87 40.2
Atru.chr10.59 Acer truncatum HOM05D000003 ORTHO05D002259 3.1e-08 62.0 80 31.2
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-08 62.0 95 27.4
Atru.chr3.3914 Acer truncatum HOM05D000003 ORTHO05D002259 3.1e-08 62.0 97 28.9
Atru.chr4.1973 Acer truncatum HOM05D000003 ORTHO05D002259 4.0e-08 61.6 95 32.6
CSS0029089 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-08 61.6 61 37.7
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.2e-08 61.2 97 30.9
Atru.chr6.253 Acer truncatum HOM05D000003 ORTHO05D002259 8.9e-08 60.5 95 25.3
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.1 98 29.6
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 1.5e-07 59.7 95 26.3
Thecc.04G121700 Theobroma cacao HOM05D000003 ORTHO05D002259 1.5e-07 59.7 97 28.9
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-07 59.3 57 38.6
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-07 59.3 57 38.6
Hma1.2p1_0402F.1_g145030 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 2.0e-07 59.3 82 32.9
Atru.chr9.316 Acer truncatum HOM05D000003 ORTHO05D002259 2.6e-07 58.9 95 28.4
CSS0017847 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-07 58.5 63 36.5
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 4.4e-07 58.2 98 26.5
Sc24g0002380 Simmondsia chinensis HOM05D003282 ORTHO05D003637 4.4e-07 58.2 54 40.7
Atru.chr1.787 Acer truncatum HOM05D002354 ORTHO05D002259 5.8e-07 57.8 97 28.9
Hma1.2p1_1754F.1_g300945 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 5.8e-07 57.8 58 36.2
Thecc.05G076400 Theobroma cacao HOM05D000003 ORTHO05D002259 5.8e-07 57.8 71 31.0
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 9.8e-07 57.0 98 28.6
Atru.chr5.3360 Acer truncatum HOM05D000003 ORTHO05D002259 9.8e-07 57.0 98 28.6
Atru.chr6.295 Acer truncatum HOM05D000003 ORTHO05D002259 9.8e-07 57.0 97 28.9
Thecc.05G198700 Theobroma cacao HOM05D000003 ORTHO05D002259 9.8e-07 57.0 69 33.3
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-06 56.6 57 36.8
CSS0011659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-06 56.2 93 31.2
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 85 27.1
Atru.chr6.1197 Acer truncatum HOM05D000003 ORTHO05D002259 2.2e-06 55.8 85 27.1
CSS0008056 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-06 55.5 54 42.6
COL.COLO4_33988 Corchorus olitorius HOM05D012135 ORTHO05D016957 2.9e-06 55.5 56 46.4
PSO017G5521 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 86 31.4
Atru.chr10.984 Acer truncatum HOM05D000502 ORTHO05D002259 4.9e-06 54.7 61 34.4
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 4.9e-06 54.7 98 25.5
Atru.chr7.607 Acer truncatum HOM05D000003 ORTHO05D002259 4.9e-06 54.7 68 29.4
Atru.chr11.503 Acer truncatum HOM05D000003 ORTHO05D002259 6.4e-06 54.3 82 28.0
PSO210G4139 Papaver somniferum HOM05D000003 ORTHO05D000004 6.4e-06 54.3 76 28.9
TWI14G0536 Tripterygium wilfordii HOM05D008457 ORTHO05D002259 6.4e-06 54.3 86 29.1
Atru.chr12.2402 Acer truncatum HOM05D000003 ORTHO05D002259 8.3e-06 53.9 82 25.6


User provided reference genes

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