Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.4e-131 473.0 246 100.0
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 5.8e-122 441.0 245 91.4
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 2.3e-118 429.1 245 87.8
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.1e-117 426.8 245 88.6
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.9e-117 426.0 257 85.6
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 3.3e-117 425.2 245 86.1
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.6e-116 422.9 245 83.7
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 2.8e-116 422.2 244 84.8
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 3.7e-116 421.8 245 83.7
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.2e-114 416.8 245 84.5
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.5e-114 416.4 245 83.7
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 5.9e-114 414.5 243 85.2
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 7.6e-114 414.1 245 85.7
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.0e-113 413.7 245 83.7
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 2.2e-113 412.5 245 83.3
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 6.5e-113 411.0 245 85.3
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 6.5e-113 411.0 250 83.2
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.1e-112 410.2 243 83.1
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.1e-112 410.2 245 82.4
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 3.2e-112 408.7 245 82.4
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 4.2e-112 408.3 240 84.2
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 4.2e-112 408.3 245 82.9
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 4.2e-112 408.3 245 82.9
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 5.5e-112 407.9 242 82.6
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 9.3e-112 407.1 245 82.4
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.2e-111 406.8 245 81.6
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.6e-111 406.4 242 82.6
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 2.1e-111 406.0 245 82.4
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 2.7e-111 405.6 245 80.4
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 2.7e-111 405.6 245 82.4
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 3.5e-111 405.2 245 82.0
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 6.1e-111 404.4 245 80.8
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 1.0e-110 403.7 245 80.8
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.8e-110 402.9 245 80.8
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.1e-109 400.2 245 81.6
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 1.9e-109 399.4 245 80.8
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 5.7e-109 397.9 245 78.4
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 5.7e-109 397.9 245 78.0
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 7.4e-109 397.5 244 80.3
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 7.4e-109 397.5 244 80.3
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 9.7e-109 397.1 245 78.8
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 9.7e-109 397.1 245 80.0
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.6e-108 396.4 245 78.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.6e-108 396.4 245 79.2
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 2.2e-108 396.0 245 78.4
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 2.2e-108 396.0 245 78.4
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 2.2e-108 396.0 245 78.4
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 2.2e-108 396.0 245 80.0
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 2.8e-108 395.6 245 78.8
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 3.7e-108 395.2 245 77.6
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 3.7e-108 395.2 245 78.8
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 3.7e-108 395.2 245 79.2
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 4.8e-108 394.8 245 80.0
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 4.8e-108 394.8 245 79.6
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 8.2e-108 394.0 245 81.2
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 8.2e-108 394.0 245 77.1
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.1e-107 393.7 245 80.0
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.8e-107 392.9 245 79.2
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 2.4e-107 392.5 245 80.0
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.1e-107 392.1 245 78.0
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.5e-106 389.8 244 78.3
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 2.0e-106 389.4 245 78.0
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 5.9e-106 387.9 245 78.8
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.7e-105 386.3 245 77.6
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 6.5e-105 384.4 245 77.1
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 2.5e-104 382.5 253 76.3
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 7.2e-104 380.9 264 72.7
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 9.4e-104 380.6 240 79.2
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.2e-103 380.2 245 77.6
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 6.1e-103 377.9 245 77.1
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 7.9e-103 377.5 245 76.7
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 7.9e-103 377.5 245 77.6
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 3.9e-102 375.2 245 75.1
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 3.3e-101 372.1 245 77.1
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 3.3e-101 372.1 245 75.5
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 2.2e-100 369.4 244 73.8
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 4.8e-100 368.2 234 79.1
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.6e-98 362.5 208 87.0
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 9.4e-96 354.0 245 73.9
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.6e-95 353.2 240 76.7
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 6.1e-95 351.3 203 86.2
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.3e-94 349.4 228 79.4
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.5e-93 346.7 242 69.4
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.0e-93 346.3 245 70.2
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.6e-93 345.9 245 70.2
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 1.3e-92 343.6 185 94.6
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 1.4e-91 340.1 245 67.3
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 4.1e-91 338.6 245 68.2
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 5.3e-91 338.2 245 66.9
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 4.5e-90 335.1 213 80.3
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 8.5e-89 330.9 198 79.3
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 3.6e-87 325.5 245 69.0
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 2.2e-84 316.2 245 66.9
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 3.1e-83 312.4 202 79.2
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 2.9e-81 305.8 245 67.8
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 6.5e-81 304.7 194 72.2
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.6e-77 292.7 263 64.6
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 2.2e-76 289.7 242 65.3
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.2e-69 267.3 242 55.0
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.4e-67 260.4 242 53.7
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 6.6e-65 251.5 238 54.2
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.0e-62 244.2 239 51.5
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 4.4e-61 238.8 156 73.7
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 5.4e-59 231.9 242 47.1
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.6e-58 230.3 202 62.9
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.3e-49 199.9 150 68.0
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 3.9e-49 199.1 149 66.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.5e-48 197.2 143 68.5
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.5e-48 196.4 162 63.0
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 4.3e-48 195.7 154 61.7
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-46 190.7 119 80.7
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 1.2e-45 187.6 113 82.3
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.0e-37 160.2 119 69.7
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 2.1e-34 150.2 92 80.4
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 4.6e-34 149.1 91 80.2
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 1.0e-33 147.9 231 39.4
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 5.2e-30 135.6 93 69.9
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 2.1e-18 97.1 71 66.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 7.9e-18 95.1 125 53.6
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 4.3e-08 62.8 38 89.5
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 7.4e-08 62.0 39 69.2


User provided reference genes

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