Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005777 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 5.1e-44 180.6 88 100.0
CSS0011716 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 7.9e-13 77.0 74 64.9
CSS0015544 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.5e-11 72.8 84 58.3
CSS0007536 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.8e-10 68.6 52 69.2
CSS0006325 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.4e-09 65.5 36 88.9
CSS0014629 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.4e-09 65.5 36 88.9
CSS0046042 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 6.9e-09 63.9 36 86.1
Actinidia09998 Actinidia chinensis HOM05D004612 ORTHO05D004940 2.6e-08 62.0 36 83.3
Prupe.2G162500 Prunus persica HOM05D004612 ORTHO05D004940 1.0e-07 60.1 36 77.8
Dinv32447 Davidia involucrata HOM05D004612 ORTHO05D004940 1.3e-07 59.7 35 80.0
Nn3g17842 Nelumbo nucifera HOM05D004612 ORTHO05D004940 2.2e-07 58.9 35 77.1
CiPaw.02G028400 Carya illinoinensis HOM05D004612 ORTHO05D004940 2.9e-07 58.5 37 70.3
QL08p049561 Quercus lobata HOM05D004612 ORTHO05D004940 2.9e-07 58.5 35 77.1
TWI59G0622 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 5.0e-07 57.8 57 54.4
CSS0040114 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 6.5e-07 57.4 36 77.8
Eucgr.D02267 Eucalyptus grandis HOM05D004612 ORTHO05D004940 8.5e-07 57.0 35 74.3
Prupe.8G034000 Prunus persica HOM05D004612 ORTHO05D004940 8.5e-07 57.0 36 75.0
Lalb_Chr10g0097231 Lupinus albus HOM05D004612 ORTHO05D004940 1.1e-06 56.6 47 61.7
vmacro13313 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.1e-06 56.6 35 74.3
Cfa003958 Carpinus fangiana HOM05D004612 ORTHO05D004940 1.4e-06 56.2 36 69.4
TWI59G1187 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 1.4e-06 56.2 36 72.2
GSVIVG01026844001 Vitis vinifera HOM05D004612 ORTHO05D004940 1.4e-06 56.2 36 75.0
CSS0020995 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.9e-06 55.8 44 70.5
Gohir.A11G082600 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.9e-06 55.8 35 74.3
Gohir.D11G091300 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.9e-06 55.8 35 74.3
Gorai.007G097300 Gossypium raimondii HOM05D004612 ORTHO05D004940 1.9e-06 55.8 35 74.3
Rhsim07G0018100 Rhododendron simsii HOM05D004612 ORTHO05D004940 1.9e-06 55.8 35 74.3
COL.COLO4_12673 Corchorus olitorius HOM05D004612 ORTHO05D004940 2.5e-06 55.5 34 73.5
Duzib133G0359 Durio zibethinus HOM05D004612 ORTHO05D004940 2.5e-06 55.5 34 73.5
Sc07g0008070 Simmondsia chinensis HOM05D004612 ORTHO05D004940 2.5e-06 55.5 34 73.5
CsaV3_3G009110 Cucumis sativus L. HOM05D004612 ORTHO05D004940 3.2e-06 55.1 34 73.5
FvH4_7g13631 Fragaria vesca HOM05D004612 ORTHO05D004940 3.2e-06 55.1 51 52.9
FAN06G2470 Fragaria x ananassa HOM05D004612 ORTHO05D004940 3.2e-06 55.1 51 52.9
FAN06G3441 Fragaria x ananassa HOM05D004612 ORTHO05D004940 3.2e-06 55.1 51 52.9
FAN10G2510 Fragaria x ananassa HOM05D004612 ORTHO05D004940 3.2e-06 55.1 51 52.9
Hma1.2p1_0033F.1_g020400 Hydrangea macrophylla HOM05D004612 ORTHO05D004940 3.2e-06 55.1 36 72.2
Lj9C580G6 Lonicera japonica HOM05D004612 ORTHO05D004940 3.2e-06 55.1 36 66.7
Oeu004526.1 Olea europaea HOM05D004612 ORTHO05D004940 3.2e-06 55.1 35 74.3
RcHm_v2.0_Chr1g0353691 Rosa chinensis HOM05D004612 ORTHO05D004940 3.2e-06 55.1 33 78.8
ClCG05G001720 Citrullus lanatus HOM05D004612 ORTHO05D004940 4.2e-06 54.7 34 73.5
MELO3C006131.2 Cucumis melo HOM05D004612 ORTHO05D004940 4.2e-06 54.7 34 73.5
Glyma.03G096900 Glycine max HOM05D004612 ORTHO05D004940 4.2e-06 54.7 33 75.8
MD07G1141600 Malus domestica HOM05D004612 ORTHO05D004940 4.2e-06 54.7 33 75.8
Phvul.011G160800 Phaseolus vulgaris HOM05D004612 ORTHO05D004940 4.2e-06 54.7 33 75.8
Thecc.01G363500 Theobroma cacao HOM05D004612 ORTHO05D004940 4.2e-06 54.7 36 72.2
vmacro13311 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 4.2e-06 54.7 35 71.4
vmacro13422 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 4.2e-06 54.7 49 55.1
Haze_15464 Corylus avellana HOM05D004612 ORTHO05D004940 5.5e-06 54.3 35 68.6
MD01G1053600 Malus domestica HOM05D004612 ORTHO05D004940 5.5e-06 54.3 33 78.8
Migut.B01722 Erythranthe guttata HOM05D004612 ORTHO05D004940 7.2e-06 53.9 52 53.8
TAR629G0951 Trochodendron aralioides HOM05D004612 ORTHO05D004940 7.2e-06 53.9 35 71.4
Cpa.g.sc20.34 Carica papaya HOM05D004612 ORTHO05D004940 9.4e-06 53.5 35 65.7
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 9.4e-06 53.5 51 51.0
FAN03G2220 Fragaria x ananassa HOM05D004612 ORTHO05D004940 9.4e-06 53.5 51 51.0
vmacro22088 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 9.4e-06 53.5 35 68.6


User provided reference genes

Program Settings