Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.3e-303 1044.6 500 100.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.9e-298 1027.3 500 98.0
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.1e-298 1026.9 500 97.8
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.3e-297 1024.2 500 97.8
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.3e-297 1023.1 500 97.6
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.6e-296 1021.9 500 97.6
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.8e-296 1021.1 500 97.6
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.4e-295 1018.8 500 97.2
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.9e-295 1016.1 500 97.0
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.4e-293 1009.6 500 96.4
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.4e-292 1006.9 500 96.2
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.1e-292 1006.5 500 96.2
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.3e-290 1001.5 500 95.8
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 1.9e-212 742.7 500 70.8
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.2e-209 733.4 509 69.2
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.8e-207 726.1 499 69.7
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 2.3e-205 719.2 502 68.1
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 5.2e-202 708.0 498 67.9
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 9.8e-201 703.7 500 68.6
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 4.9e-200 701.4 474 70.0
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 7.0e-199 697.6 497 67.4
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 6.0e-198 694.5 479 68.9
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 2.5e-196 689.1 504 68.1
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 5.6e-196 688.0 501 66.7
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 3.6e-195 685.3 498 65.7
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 3.6e-195 685.3 470 68.5
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 1.5e-193 679.9 499 65.7
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 8.3e-192 674.1 505 65.3
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 1.0e-189 667.2 497 65.2
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 3.3e-188 662.1 402 76.1
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.6e-187 659.8 503 64.2
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 2.8e-187 659.1 509 63.7
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.8e-186 656.4 488 64.5
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.7e-184 649.8 404 75.0
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 6.4e-184 647.9 475 66.7
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 6.4e-184 647.9 502 63.3
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 8.3e-184 647.5 500 61.8
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.9e-183 646.4 400 75.0
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 5.4e-183 644.8 400 74.2
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 5.4e-183 644.8 400 74.8
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 2.1e-182 642.9 360 80.3
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 2.1e-182 642.9 485 65.4
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 4.6e-182 641.7 404 76.2
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 1.7e-181 639.8 415 71.6
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 3.0e-181 639.0 494 62.6
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 3.0e-181 639.0 499 62.1
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 6.6e-181 637.9 499 62.9
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.1e-180 637.1 489 64.0
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 1.5e-180 636.7 500 63.6
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.5e-180 636.7 398 74.9
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.9e-180 636.3 496 62.9
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 5.6e-180 634.8 500 62.0
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 2.8e-179 632.5 487 63.4
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.4e-178 630.2 409 71.4
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 1.2e-177 627.1 500 62.4
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.0e-177 626.3 405 70.9
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 2.0e-177 626.3 501 61.5
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 4.4e-177 625.2 500 60.2
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 4.4e-177 625.2 507 61.3
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 7.6e-177 624.4 479 64.3
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 9.9e-177 624.0 501 61.3
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 6.4e-176 621.3 378 74.1
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 7.1e-175 617.8 400 71.8
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 2.1e-174 616.3 493 61.5
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 4.6e-174 615.1 501 61.5
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 6.0e-174 614.8 487 62.4
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 6.0e-174 614.8 400 70.2
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 6.0e-174 614.8 495 59.4
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 1.3e-173 613.6 350 83.4
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 4.3e-172 608.6 400 70.8
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 5.6e-172 608.2 487 61.8
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 7.3e-172 607.8 400 70.5
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 7.3e-172 607.8 402 70.6
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.4e-170 603.6 401 70.1
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 2.0e-169 599.7 502 59.8
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 2.0e-169 599.7 396 71.0
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 2.6e-169 599.4 507 59.8
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 7.6e-169 597.8 393 71.0
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 4.6e-166 588.6 403 67.5
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 7.8e-166 587.8 499 57.9
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 1.0e-165 587.4 370 73.2
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 3.5e-158 562.4 359 71.9
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 6.0e-158 561.6 372 69.4
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 2.3e-157 559.7 443 60.7
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 9.6e-156 554.3 391 66.2
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.3e-155 553.9 430 62.1
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 2.8e-155 552.7 477 58.1
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 2.5e-151 539.7 507 53.8
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 5.5e-151 538.5 350 70.3
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 7.9e-150 534.6 442 58.6
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 2.3e-149 533.1 489 57.1
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 2.6e-129 466.5 391 57.0
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 7.7e-129 464.9 386 58.3
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 2.6e-124 449.9 293 72.7
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 3.6e-118 429.5 477 50.5
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 3.9e-117 426.0 353 59.2
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 3.4e-108 396.4 401 49.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 1.5e-95 354.4 296 57.4
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.9e-91 340.1 209 74.6
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.0e-85 321.6 433 40.0
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.1e-82 311.6 434 40.1
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 3.0e-72 276.9 447 36.9
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.3e-64 251.5 302 44.7
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 2.1e-62 244.2 399 37.8
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 1.8e-61 241.1 162 69.1
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 7.1e-42 176.0 223 43.9
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.0e-40 172.2 319 31.7
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 3.1e-29 134.0 308 32.5
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.5e-28 131.7 100 66.0
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 8.7e-24 115.9 295 29.5
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 4.2e-18 97.1 73 63.0
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 2.3e-16 91.3 80 53.8
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 1.9e-10 71.6 115 34.8


User provided reference genes

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