Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 1.1e-164 583.2 296 100.0
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 1.9e-74 283.5 318 53.1
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.2e-73 280.8 302 52.6
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 2.1e-73 280.0 308 51.9
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 4.8e-62 242.3 278 50.7
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 2.2e-54 216.9 233 50.6
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 1.1e-53 214.5 290 44.1
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 2.2e-46 190.3 296 42.9
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 3.1e-45 186.4 300 39.7
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 3.1e-45 186.4 295 42.4
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 4.1e-45 186.0 326 39.0
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 5.3e-45 185.7 332 39.5
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 3.8e-43 179.5 229 45.4
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 1.4e-42 177.6 286 42.3
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 1.9e-42 177.2 272 40.1
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.2e-41 174.5 278 41.0
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 1.2e-41 174.5 232 42.7
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 1.0e-40 171.4 289 37.4
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 1.0e-40 171.4 309 35.6
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.8e-40 170.6 222 46.4
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 2.3e-40 170.2 279 36.9
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 1.1e-39 167.9 298 38.3
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 4.4e-39 166.0 310 38.1
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 2.2e-38 163.7 300 37.3
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 6.3e-38 162.2 285 37.2
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 4.1e-37 159.5 298 36.9
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 4.1e-37 159.5 301 36.2
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 2.6e-36 156.8 265 40.0
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 5.9e-36 155.6 236 43.2
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 5.9e-36 155.6 236 43.2
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 2.2e-35 153.7 196 42.9
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 5.0e-35 152.5 274 37.6
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 1.1e-34 151.4 256 38.3
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 3.2e-34 149.8 298 37.2
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 4.2e-34 149.4 280 36.4
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 2.1e-33 147.1 284 35.2
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.7e-33 146.7 234 39.7
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 2.7e-33 146.7 232 38.4
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 2.7e-33 146.7 291 35.7
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 8.0e-33 145.2 224 39.3
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.0e-32 144.8 185 40.5
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 1.4e-32 144.4 279 35.5
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.4e-32 144.4 185 40.5
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 3.0e-32 143.3 259 35.5
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 4.0e-32 142.9 291 34.7
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 4.0e-32 142.9 185 40.0
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 6.7e-32 142.1 313 34.8
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 1.2e-31 141.4 277 35.7
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 2.6e-31 140.2 256 37.5
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 3.3e-31 139.8 261 35.6
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 4.4e-31 139.4 313 36.4
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 9.7e-31 138.3 285 37.9
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 9.7e-31 138.3 193 43.0
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 6.3e-30 135.6 281 33.1
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.1e-29 134.8 296 36.1
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 3.1e-29 133.3 294 33.0
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 9.1e-29 131.7 262 34.7
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 5.0e-27 125.9 273 33.0
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 1.5e-26 124.4 302 32.8
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 3.2e-26 123.2 143 46.9
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 7.2e-26 122.1 194 40.2
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 9.4e-26 121.7 300 35.0
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 9.4e-26 121.7 172 44.2
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 2.1e-25 120.6 155 43.2
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 1.8e-24 117.5 232 34.5
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 5.2e-24 115.9 308 32.1
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.2e-23 114.8 296 32.1
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.2e-23 114.8 296 32.1
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 5.7e-23 112.5 288 34.4
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 9.8e-23 111.7 312 31.1
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 9.8e-23 111.7 298 31.5
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 5.4e-21 105.9 164 36.6
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 9.1e-21 105.1 229 34.9
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 2.7e-20 103.6 170 38.2
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 1.7e-19 100.9 263 30.8
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 2.3e-19 100.5 305 28.5
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 1.1e-18 98.2 179 38.5
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 1.5e-18 97.8 282 33.0
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 2.5e-18 97.1 250 29.2
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 3.2e-18 96.7 186 33.9
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 5.5e-18 95.9 280 30.7
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 6.1e-17 92.4 286 29.4
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 1.8e-16 90.9 164 35.4
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 1.8e-16 90.9 164 35.4
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 4.0e-16 89.7 286 28.7
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 4.0e-16 89.7 189 32.3
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 8.8e-16 88.6 164 33.5
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 2.6e-15 87.0 286 28.3
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 2.6e-15 87.0 267 27.0
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 3.4e-15 86.7 286 28.7
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 3.4e-15 86.7 262 29.0
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 4.4e-15 86.3 201 31.3
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 4.4e-15 86.3 253 32.0
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 5.7e-15 85.9 164 32.3
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 5.7e-15 85.9 197 31.5
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 2.2e-14 84.0 286 27.6
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 2.2e-14 84.0 286 27.6
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 9.2e-13 78.6 223 33.6
ECA233G3449 Erigeron canadensis HOM05D007857 ORTHO05D009355 6.6e-11 72.4 231 29.9
Lj6E824T1 Lonicera japonica HOM05D007857 ORTHO05D009355 8.0e-09 65.5 211 30.3
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 1.8e-08 64.3 254 29.9
Os04g0504700 Oryza sativa ssp. japonica HOM05D007857 ORTHO05D009355 2.9e-06 57.0 110 30.0


User provided reference genes

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