Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005738 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 5.5e-33 143.7 70 100.0
Actinidia08974 Actinidia chinensis HOM05D004642 ORTHO05D005466 1.4e-12 75.9 48 77.1
Rhsim12G0197600 Rhododendron simsii HOM05D004642 ORTHO05D005466 1.2e-11 72.8 52 71.2
Hma1.2p1_0323F.1_g125200 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 2.0e-11 72.0 48 72.9
Actinidia24760 Actinidia chinensis HOM05D004642 ORTHO05D005466 3.5e-11 71.2 48 70.8
Haze_16437 Corylus avellana HOM05D004642 ORTHO05D005466 2.2e-10 68.6 48 66.7
Hma1.2p1_0323F.1_g125210 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 2.2e-10 68.6 48 68.8
Cfa002061 Carpinus fangiana HOM05D004642 ORTHO05D005466 2.9e-10 68.2 48 66.7
FAN05G5776 Fragaria x ananassa HOM05D004642 ORTHO05D005466 5.0e-10 67.4 53 64.2
FAN09G1651 Fragaria x ananassa HOM05D004642 ORTHO05D005466 5.0e-10 67.4 53 64.2
Lj5A61G44 Lonicera japonica HOM05D004642 ORTHO05D005466 5.0e-10 67.4 52 61.5
QL05p024308 Quercus lobata HOM05D004642 ORTHO05D005466 5.0e-10 67.4 53 60.4
Rhsim08G0221000 Rhododendron simsii HOM05D004642 ORTHO05D005466 5.0e-10 67.4 48 72.9
Dinv30514 Davidia involucrata HOM05D004642 ORTHO05D005466 6.5e-10 67.0 47 70.2
RcHm_v2.0_Chr2g0137781 Rosa chinensis HOM05D004642 ORTHO05D005466 8.5e-10 66.6 45 66.7
PGR102G3321 Punica granatum HOM05D004642 ORTHO05D005466 1.5e-09 65.9 52 63.5
FAN02G1410 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.5e-09 65.1 53 62.3
FAN14G2337 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.5e-09 65.1 53 62.3
TWI75G1656 Tripterygium wilfordii HOM05D004642 ORTHO05D005466 9.4e-09 63.2 48 64.6
GSVIVG01017115001 Vitis vinifera HOM05D004642 ORTHO05D005466 1.6e-08 62.4 48 62.5
vmacro16950 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 2.1e-08 62.0 47 68.1
FvH4_6g31081 Fragaria vesca HOM05D004642 ORTHO05D005466 2.7e-08 61.6 47 66.0
MD09G1213800 Malus domestica HOM05D004642 ORTHO05D005466 2.7e-08 61.6 52 55.8
TAR636G0382 Trochodendron aralioides HOM05D004642 ORTHO05D005466 3.6e-08 61.2 52 59.6
CiPaw.01G239700 Carya illinoinensis HOM05D004642 ORTHO05D005466 1.0e-07 59.7 48 60.4
Cc04_g03480 Coffea canephora HOM05D004642 ORTHO05D005466 1.8e-07 58.9 48 60.4
Sabra01G0147200 Salix brachista HOM05D004642 ORTHO05D005466 3.0e-07 58.2 45 62.2
MD17G1195700 Malus domestica HOM05D004642 ORTHO05D005466 4.0e-07 57.8 52 50.0
CANSAT56G1090 Cannabis sativa HOM05D004642 ORTHO05D005466 5.2e-07 57.4 51 52.9
ECA248G0988 Erigeron canadensis HOM05D004642 ORTHO05D005466 6.7e-07 57.0 50 60.0
Nitab4.5_0005851g0030 Nicotiana tabacum HOM05D004642 ORTHO05D005466 6.7e-07 57.0 48 58.3
Lsat_1_v5_gn_4_103580 Lactuca sativa HOM05D004642 ORTHO05D005466 8.8e-07 56.6 51 56.9
Nitab4.5_0000671g0060 Nicotiana tabacum HOM05D004642 ORTHO05D005466 8.8e-07 56.6 48 58.3
Aqoxy7G01787 Aquilegia oxysepala HOM05D004642 ORTHO05D005466 1.5e-06 55.8 60 50.0
BcaB04g18872 Brassica carinata HOM05D004642 ORTHO05D005466 1.5e-06 55.8 44 65.9
HanXRQChr16g0500971 Helianthus annuus HOM05D004642 ORTHO05D005466 1.5e-06 55.8 48 58.3
AUR62011627 Chenopodium quinoa HOM05D004642 ORTHO05D005466 2.0e-06 55.5 53 52.8
Potri.001G179600 Populus trichocarpa HOM05D004642 ORTHO05D005466 2.6e-06 55.1 45 60.0
Hund00614 Selenicereus undatus HOM05D004642 ORTHO05D005466 2.6e-06 55.1 48 54.2
Nn2g11790 Nelumbo nucifera HOM05D004642 ORTHO05D005466 3.3e-06 54.7 52 55.8
AUR62016441 Chenopodium quinoa HOM05D004642 ORTHO05D005466 4.4e-06 54.3 53 50.9
Sp3g14350 Schrenkiella parvula HOM05D004642 ORTHO05D005466 4.4e-06 54.3 40 70.0
Solyc03g120230.3 Solanum lycopersicum HOM05D004642 ORTHO05D005466 4.4e-06 54.3 48 56.2
Sopen03g039110 Solanum pennellii HOM05D004642 ORTHO05D005466 4.4e-06 54.3 48 56.2
BcaB04g20887 Brassica carinata HOM05D004642 ORTHO05D005466 5.7e-06 53.9 42 64.3
CAN.G438.64 Capsicum annuum HOM05D004642 ORTHO05D005466 5.7e-06 53.9 48 56.2
MD09G1213500 Malus domestica HOM05D004642 ORTHO05D005466 5.7e-06 53.9 47 53.2
Prupe.3G071700 Prunus persica HOM05D004642 ORTHO05D005466 5.7e-06 53.9 42 61.9
vmacro18915 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 5.7e-06 53.9 48 62.5
Oeu033484.1 Olea europaea HOM05D004642 ORTHO05D005466 7.5e-06 53.5 48 56.2
PGSC0003DMG400002564 Solanum tuberosum HOM05D004642 ORTHO05D005466 7.5e-06 53.5 48 56.2
BcaC01g03843 Brassica carinata HOM05D004642 ORTHO05D005466 9.7e-06 53.1 41 68.3
C03p48030 Brassica napus HOM05D004642 ORTHO05D005466 9.7e-06 53.1 41 68.3
BolC3t17082H Brassica oleracea HOM05D004642 ORTHO05D005466 9.7e-06 53.1 41 68.3
CARHR091130 Cardamine hirsuta HOM05D004642 ORTHO05D005466 9.7e-06 53.1 52 53.8
Glyma.11G237600 Glycine max HOM05D004642 ORTHO05D005466 9.7e-06 53.1 52 51.9
HanXRQChr09g0275271 Helianthus annuus HOM05D004642 ORTHO05D005466 9.7e-06 53.1 62 50.0
Nn8g39228 Nelumbo nucifera HOM05D004642 ORTHO05D005466 9.7e-06 53.1 52 51.9
Peaxi162Scf00015g00335 Petunia axillaris HOM05D004642 ORTHO05D005466 9.7e-06 53.1 48 56.2


User provided reference genes

Program Settings