Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 3.5e-34 147.5 65 100.0
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 1.6e-23 112.1 64 76.6
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 2.8e-23 111.3 60 81.7
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 6.2e-23 110.2 60 83.3
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 6.2e-23 110.2 60 80.0
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.1e-22 109.4 60 81.7
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 1.8e-22 108.6 60 81.7
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 1.8e-22 108.6 60 81.7
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.8e-22 108.6 60 78.3
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 1.8e-22 108.6 60 78.3
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.8e-22 108.6 57 82.5
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 2.4e-22 108.2 60 78.3
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 2.4e-22 108.2 58 81.0
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 2.4e-22 108.2 60 76.7
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 3.1e-22 107.8 60 81.7
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 3.1e-22 107.8 60 81.7
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 3.1e-22 107.8 58 81.0
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 3.1e-22 107.8 60 78.3
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 4.0e-22 107.5 60 78.3
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 4.0e-22 107.5 60 80.0
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 4.0e-22 107.5 60 80.0
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 4.0e-22 107.5 60 76.7
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 5.3e-22 107.1 60 80.0
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 5.3e-22 107.1 60 81.7
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 5.3e-22 107.1 60 80.0
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 9.0e-22 106.3 57 82.5
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 9.0e-22 106.3 60 75.0
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 9.0e-22 106.3 60 76.7
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.2e-21 105.9 60 76.7
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.2e-21 105.9 60 76.7
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 1.2e-21 105.9 60 76.7
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 1.2e-21 105.9 60 76.7
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.2e-21 105.9 57 80.7
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 1.2e-21 105.9 60 76.7
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 1.2e-21 105.9 57 80.7
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 1.5e-21 105.5 60 78.3
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 1.5e-21 105.5 58 79.3
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 1.5e-21 105.5 60 80.0
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 1.5e-21 105.5 60 78.3
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 1.5e-21 105.5 57 78.9
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 1.5e-21 105.5 58 77.6
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.5e-21 105.5 57 78.9
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.0e-21 105.1 58 75.9
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.0e-21 105.1 58 75.9
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 2.0e-21 105.1 60 76.7
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 2.0e-21 105.1 60 76.7
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.6e-21 104.8 60 76.7
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 2.6e-21 104.8 57 78.9
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 2.6e-21 104.8 60 76.7
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 3.4e-21 104.4 60 78.3
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 3.4e-21 104.4 60 75.0
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 4.5e-21 104.0 60 76.7
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 4.5e-21 104.0 57 77.2
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 5.8e-21 103.6 60 75.0
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 5.8e-21 103.6 60 75.0
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 5.8e-21 103.6 56 78.6
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 1.0e-20 102.8 58 75.9
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.0e-20 102.8 58 75.9
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.0e-20 102.8 58 75.9
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.0e-20 102.8 57 75.4
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.0e-20 102.8 57 75.4
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 1.0e-20 102.8 58 77.6
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 1.3e-20 102.4 54 79.6
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 1.3e-20 102.4 58 75.9
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 1.7e-20 102.1 63 71.4
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 2.2e-20 101.7 60 76.7
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 2.2e-20 101.7 58 74.1
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 2.9e-20 101.3 58 74.1
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 2.9e-20 101.3 60 76.7
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 6.5e-20 100.1 58 74.1
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 6.5e-20 100.1 58 74.1
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 8.4e-20 99.8 59 74.6
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 8.4e-20 99.8 58 74.1
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 8.4e-20 99.8 60 73.3
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 8.4e-20 99.8 59 72.9
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 1.1e-19 99.4 58 74.1
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 1.1e-19 99.4 58 74.1
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 1.1e-19 99.4 58 74.1
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 1.1e-19 99.4 58 74.1
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 1.1e-19 99.4 58 74.1
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 1.1e-19 99.4 60 75.0
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.1e-19 99.4 56 71.4
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 1.4e-19 99.0 58 72.4
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 1.4e-19 99.0 60 75.0
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 1.4e-19 99.0 57 71.9
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 1.9e-19 98.6 59 71.2
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 2.5e-19 98.2 62 74.2
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 2.5e-19 98.2 60 75.0
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 3.2e-19 97.8 58 72.4
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 3.2e-19 97.8 60 73.3
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 4.2e-19 97.4 58 69.0
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 4.2e-19 97.4 58 72.4
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 4.2e-19 97.4 58 72.4
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 4.2e-19 97.4 58 72.4
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 4.2e-19 97.4 58 72.4
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 4.2e-19 97.4 58 72.4
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 4.2e-19 97.4 58 72.4
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 7.1e-19 96.7 60 76.7
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 9.3e-19 96.3 58 70.7
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 9.3e-19 96.3 58 70.7
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 9.3e-19 96.3 58 70.7
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.6e-18 95.5 59 67.8
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 2.7e-18 94.7 59 71.2
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 3.5e-18 94.4 58 70.7
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 6.0e-18 93.6 59 67.8
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 7.9e-18 93.2 58 69.0
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 1.0e-17 92.8 57 70.2
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 1.8e-17 92.0 54 72.2
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 1.1e-16 89.4 59 67.8
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 5.7e-16 87.0 46 82.6
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 9.6e-16 86.3 46 80.4
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 6.3e-15 83.6 59 62.7
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 6.3e-15 83.6 59 62.7
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 6.3e-15 83.6 59 62.7
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 6.3e-15 83.6 56 67.9
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 2.4e-14 81.6 59 55.9
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 3.1e-14 81.3 53 64.2
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 4.1e-14 80.9 46 78.3
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 4.1e-14 80.9 51 66.7
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 5.3e-14 80.5 47 72.3
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 1.5e-13 79.0 46 69.6
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 2.6e-13 78.2 47 68.1
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 5.9e-13 77.0 57 56.1
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 7.6e-13 76.6 57 57.9
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 1.0e-12 76.3 50 70.0
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 1.3e-12 75.9 47 66.0
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 1.3e-12 75.9 56 58.9
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 2.2e-12 75.1 47 63.8
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 1.1e-11 72.8 41 78.0
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 1.9e-11 72.0 47 63.8
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 5.5e-11 70.5 57 61.4
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 7.2e-11 70.1 72 48.6
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 2.7e-10 68.2 54 50.0
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 8.7e-09 63.2 57 50.9
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 1.1e-06 56.2 49 53.1
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 5.3e-06 53.9 50 44.0


User provided reference genes

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