Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005706 Camellia sinensis var. sinensis HOM05D012179 ORTHO05D017254 2.8e-134 481.9 233 100.0
CSS0025276 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.9e-13 80.5 210 29.0
CSS0045263 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 7.2e-13 78.6 205 32.7
CSS0014901 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.0e-11 74.7 203 31.0
CSS0005143 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 3.0e-11 73.2 207 30.0
CSS0029161 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 8.8e-11 71.6 110 38.2
CSS0029673 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 8.8e-11 71.6 205 30.2
CSS0000244 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.2e-10 71.2 160 31.9
CSS0028966 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.5e-10 70.9 154 33.8
CSS0031319 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 2.0e-10 70.5 224 30.8
CSS0003904 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.7e-10 68.9 157 31.8
CSS0016021 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.5e-10 68.6 158 31.0
CSS0005680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-09 67.4 163 31.3
CSS0013298 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 2.2e-09 67.0 154 32.5
CSS0047854 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.2e-09 67.0 161 31.1
Actinidia38818 Actinidia chinensis HOM05D000876 ORTHO05D000285 1.1e-08 64.7 150 32.7
Actinidia04386 Actinidia chinensis HOM05D000876 ORTHO05D000285 2.4e-08 63.5 158 31.0
Actinidia07377 Actinidia chinensis HOM05D000876 ORTHO05D000285 2.4e-08 63.5 158 31.0
Actinidia15148 Actinidia chinensis HOM05D000876 ORTHO05D000285 2.4e-08 63.5 158 31.0
CSS0015075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.1e-08 63.2 167 31.7
CSS0024057 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.1e-08 63.2 167 31.7
CSS0027195 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 4.1e-08 62.8 132 32.6
CSS0009659 Camellia sinensis var. sinensis HOM05D012179 ORTHO05D017254 5.3e-08 62.4 87 37.9
CSS0014704 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.2e-07 61.2 167 31.7
CSS0050095 Camellia sinensis var. sinensis HOM05D012179 ORTHO05D017254 1.2e-07 61.2 87 40.2
CSS0018424 Camellia sinensis var. sinensis HOM05D012179 ORTHO05D111314 2.0e-07 60.5 95 37.9
CSS0049565 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.0e-07 60.5 154 33.8
AUR62029027 Chenopodium quinoa HOM05D000876 ORTHO05D017254 2.7e-07 60.1 117 29.1
CSS0034660 Camellia sinensis var. sinensis HOM05D012179 ORTHO05D017254 3.5e-07 59.7 87 39.1
CSS0014212 Camellia sinensis var. sinensis HOM05D012179 ORTHO05D017254 5.9e-07 58.9 87 37.9
CSS0036694 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 5.9e-07 58.9 148 33.1
AUR62033924 Chenopodium quinoa HOM05D000876 ORTHO05D017254 5.9e-07 58.9 100 30.0
CSS0041660 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 7.7e-07 58.5 131 32.1
Ah.08g221700 Amaranthus hybridus HOM05D000876 ORTHO05D017254 1.7e-06 57.4 57 49.1
CSS0018277 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 5.0e-06 55.8 74 40.5
Actinidia32819 Actinidia chinensis HOM05D000876 ORTHO05D000285 8.5e-06 55.1 73 42.5


User provided reference genes

Program Settings