Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.1e-183 645.6 327 100.0
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 4.6e-183 644.4 327 99.7
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 1.5e-173 612.8 327 93.6
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 1.0e-169 600.1 328 91.8
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 4.2e-168 594.7 327 89.9
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 9.7e-165 583.6 327 89.0
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 2.0e-157 559.3 327 85.3
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 2.6e-157 558.9 327 84.4
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 1.7e-156 556.2 327 85.3
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 3.7e-156 555.1 328 85.1
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.2e-154 550.1 328 82.6
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 2.0e-154 549.3 328 82.0
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 4.5e-154 548.1 328 82.9
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 7.7e-154 547.4 327 82.6
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.7e-153 546.2 328 82.6
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 6.5e-153 544.3 328 81.4
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 4.2e-152 541.6 328 82.0
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 1.4e-150 536.6 327 82.3
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 5.2e-150 534.6 327 80.4
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 2.0e-149 532.7 324 81.8
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 3.3e-149 531.9 327 81.7
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.3e-148 530.0 327 80.1
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 2.2e-148 529.3 327 81.3
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 2.2e-148 529.3 327 80.1
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 2.8e-148 528.9 327 81.7
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.1e-147 526.9 327 79.8
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 1.8e-147 526.2 327 79.8
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 4.1e-147 525.0 327 79.8
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 4.1e-147 525.0 327 80.1
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 7.0e-147 524.2 327 81.3
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 7.0e-147 524.2 327 79.8
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 9.1e-147 523.9 327 79.8
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 2.0e-146 522.7 328 80.8
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 5.0e-145 518.1 327 79.2
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.5e-144 516.5 327 78.6
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 4.2e-144 515.0 327 78.6
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-143 513.5 325 80.0
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 1.6e-143 513.1 327 77.7
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 2.7e-143 512.3 327 78.0
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 4.7e-143 511.5 324 79.0
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 1.8e-142 509.6 328 78.7
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 8.8e-142 507.3 327 75.8
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.5e-141 506.5 327 78.0
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 5.7e-141 504.6 325 76.9
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 2.2e-140 502.7 329 77.2
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.7e-140 501.9 327 77.1
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 3.7e-140 501.9 327 77.1
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.7e-140 501.9 327 76.8
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 4.8e-140 501.5 327 75.8
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 8.3e-140 500.7 327 76.8
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 8.3e-140 500.7 327 77.1
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.1e-139 500.4 303 80.9
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 1.4e-139 500.0 327 76.5
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.4e-139 500.0 327 75.2
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 3.1e-139 498.8 327 75.2
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 3.1e-139 498.8 327 75.5
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 1.2e-138 496.9 327 74.9
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 1.6e-138 496.5 327 74.9
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 1.6e-138 496.5 327 74.9
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 2.0e-138 496.1 327 74.9
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 2.0e-138 496.1 327 74.6
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 2.0e-138 496.1 327 75.2
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 4.5e-138 495.0 327 74.3
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 3.8e-137 491.9 327 74.3
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 1.5e-136 490.0 327 74.3
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 1.9e-136 489.6 327 74.3
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 9.4e-136 487.3 327 73.7
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 2.1e-135 486.1 327 72.8
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 4.7e-135 485.0 327 74.0
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.4e-134 483.4 327 74.0
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 1.8e-134 483.0 330 74.5
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 2.3e-134 482.6 327 72.8
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 4.0e-134 481.9 327 73.1
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 5.2e-134 481.5 327 73.4
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 5.2e-134 481.5 327 73.4
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.6e-133 479.2 325 75.7
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 5.7e-133 478.0 327 71.9
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 7.5e-133 477.6 327 71.9
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 2.2e-132 476.1 327 71.9
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 9.1e-131 470.7 327 70.9
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 5.0e-129 464.9 324 71.3
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.3e-128 462.2 325 73.2
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 3.0e-126 455.7 303 73.9
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 3.4e-125 452.2 327 68.5
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.8e-125 450.7 306 76.1
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.2e-124 449.5 327 68.5
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.4e-123 446.0 306 74.8
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 4.1e-123 445.3 327 67.3
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 3.5e-122 442.2 327 68.5
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.7e-121 439.9 312 74.4
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 5.6e-120 434.9 326 64.7
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 2.1e-119 433.0 332 63.6
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 7.3e-112 407.9 327 65.7
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 2.8e-111 406.0 322 60.9
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 1.1e-110 404.1 325 62.5
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 2.3e-110 402.9 264 76.1
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 9.8e-109 397.5 275 74.2
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 4.1e-107 392.1 324 58.6
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 5.4e-107 391.7 325 60.9
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.0e-105 387.5 318 61.9
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 1.0e-105 387.5 214 90.2
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 3.0e-105 386.0 334 57.8
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 7.5e-101 371.3 327 56.9
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.8e-98 361.3 263 73.4
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 1.7e-97 360.1 235 77.0
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 3.9e-97 359.0 300 61.0
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.1e-96 357.5 323 52.9
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 6.6e-89 331.6 294 60.5
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.3e-88 328.2 312 59.6
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 2.8e-87 326.2 328 49.4
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 5.8e-85 318.5 292 57.5
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.8e-79 299.7 221 68.3
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 3.8e-60 236.1 304 46.7
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 1.7e-44 184.1 161 59.6
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.8e-41 174.1 121 69.4
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 2.9e-36 156.8 279 35.5
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.8e-31 140.2 98 68.4
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 3.1e-30 136.7 123 57.7
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 4.5e-29 132.9 95 61.1
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.7e-28 131.0 115 57.4
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 2.5e-27 127.1 374 29.4
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 2.3e-25 120.6 62 90.3
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.4e-24 116.3 98 60.2
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 2.2e-23 114.0 339 28.6
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.8e-22 110.9 72 76.4
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.3e-15 88.2 62 66.1


User provided reference genes

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