Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.3e-299 1032.3 533 100.0
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 4.1e-290 1000.7 533 95.5
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 2.4e-205 719.2 541 69.7
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 2.5e-194 682.6 532 65.0
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 9.5e-194 680.6 533 66.8
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 4.7e-193 678.3 451 74.9
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 4.7e-193 678.3 534 66.9
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 5.2e-192 674.9 454 75.1
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 2.9e-190 669.1 455 73.2
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 3.2e-189 665.6 540 66.5
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 6.0e-188 661.4 555 61.8
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 7.8e-188 661.0 537 63.9
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.7e-187 659.8 397 81.4
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 2.3e-187 659.4 531 65.3
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 8.6e-187 657.5 441 76.2
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 1.1e-186 657.1 442 74.4
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 1.6e-185 653.3 537 64.6
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 3.6e-185 652.1 455 73.2
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 1.2e-183 647.1 469 69.1
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 7.5e-183 644.4 551 61.9
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 9.8e-183 644.0 557 61.4
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 3.7e-182 642.1 438 72.4
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 7.0e-181 637.9 470 67.2
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 9.2e-181 637.5 534 62.5
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 2.1e-180 636.3 465 68.6
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 7.8e-180 634.4 439 72.0
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 1.0e-179 634.0 429 73.7
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.7e-179 633.3 420 76.2
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.7e-179 633.3 445 70.8
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 5.1e-179 631.7 575 59.8
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 1.5e-178 630.2 540 61.3
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 2.5e-178 629.4 455 69.9
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.3e-178 629.0 460 68.9
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 3.3e-178 629.0 471 68.4
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 3.3e-178 629.0 460 68.7
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 5.6e-178 628.2 485 66.0
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 5.6e-178 628.2 453 68.7
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 9.5e-178 627.5 460 68.9
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 9.5e-178 627.5 460 68.9
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.2e-177 627.1 460 68.9
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 1.2e-177 627.1 534 61.4
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 1.2e-177 627.1 539 62.5
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.6e-177 626.7 460 68.7
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 2.1e-177 626.3 390 77.9
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 4.7e-177 625.2 537 61.5
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 6.2e-177 624.8 575 59.5
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 5.2e-176 621.7 457 70.0
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 8.9e-176 620.9 528 62.3
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 1.2e-175 620.5 535 62.1
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 1.5e-175 620.2 457 68.1
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 2.0e-175 619.8 537 60.9
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.7e-174 616.7 459 68.0
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 4.9e-174 615.1 483 65.6
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 4.9e-174 615.1 480 65.8
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 8.3e-174 614.4 530 62.8
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 8.3e-174 614.4 450 68.0
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 2.4e-173 612.8 458 68.8
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 7.8e-172 607.8 535 61.5
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.3e-171 606.3 509 62.3
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.3e-171 606.3 535 61.5
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 2.3e-171 606.3 484 65.9
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 6.6e-171 604.7 449 68.2
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.5e-170 603.6 472 65.7
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 3.3e-170 602.4 448 69.0
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 4.3e-170 602.1 469 65.7
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 7.3e-170 601.3 534 60.7
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 3.6e-169 599.0 463 66.5
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 1.4e-168 597.0 450 68.4
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 4.4e-167 592.0 532 59.2
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 6.4e-166 588.2 447 66.2
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 5.4e-165 585.1 490 62.7
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 1.2e-164 583.9 547 59.0
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 2.7e-164 582.8 461 64.9
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 1.0e-163 580.9 449 66.4
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 1.7e-163 580.1 543 59.1
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 5.1e-163 578.6 466 65.0
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 5.1e-163 578.6 461 65.7
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 1.5e-162 577.0 452 64.2
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 1.5e-162 577.0 461 64.4
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 1.9e-162 576.6 446 66.1
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 1.9e-162 576.6 446 66.1
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 3.3e-162 575.9 481 62.6
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 3.3e-162 575.9 373 74.8
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 4.4e-159 565.5 444 64.2
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 8.4e-158 561.2 477 63.3
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 6.0e-156 555.1 473 61.9
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 2.4e-152 543.1 445 63.1
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 5.3e-152 542.0 490 59.8
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.5e-151 540.4 404 67.6
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 7.6e-151 538.1 471 59.7
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 4.6e-148 528.9 434 62.7
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 1.0e-147 527.7 385 69.6
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 1.3e-147 527.3 672 47.0
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 1.9e-146 523.5 447 59.1
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.1e-141 507.7 443 58.9
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 1.2e-124 451.1 256 82.4
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 2.0e-122 443.7 337 65.0
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 7.2e-101 372.1 243 74.1
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.5e-90 337.8 341 54.8
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 4.4e-90 336.3 289 61.6
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 7.5e-90 335.5 194 80.4
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 1.3e-86 324.7 343 56.0
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.6e-84 317.8 343 53.4
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 6.8e-83 312.4 183 80.9
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 4.1e-80 303.1 482 38.6
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 3.5e-71 273.5 163 78.5
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 3.9e-70 270.0 224 57.1
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 3.4e-58 230.3 578 29.4
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 1.3e-57 228.4 595 30.8
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 7.8e-55 219.2 221 53.4
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 1.4e-51 208.4 449 30.5
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 1.4e-40 171.8 138 68.1
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 1.6e-36 158.3 362 29.6
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 1.7e-33 148.3 108 68.5
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 5.5e-32 143.3 166 47.6
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 6.5e-25 119.8 62 83.9
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 3.2e-24 117.5 82 64.6
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 3.3e-21 107.5 161 40.4
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.2e-18 99.0 58 74.1
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 2.5e-16 91.3 68 69.1
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 5.1e-14 83.6 154 34.4
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 5.3e-11 73.6 97 41.2
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 3.4e-10 70.9 261 25.3
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.0e-09 69.3 77 53.2
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 3.2e-08 64.3 42 66.7
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 9.4e-08 62.8 99 35.4


User provided reference genes

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