Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 3.2e-65 251.5 119 100.0
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 1.2e-43 179.9 122 73.0
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.2e-32 143.3 109 65.1
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 7.4e-30 134.0 121 58.7
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 9.6e-30 133.7 123 53.7
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 6.9e-28 127.5 122 59.0
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 1.2e-27 126.7 126 53.2
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 1.8e-23 112.8 124 49.2
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 2.3e-23 112.5 119 47.1
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 9.7e-22 107.1 115 50.4
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 2.2e-21 105.9 125 47.2
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 3.7e-21 105.1 118 44.1
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 3.1e-20 102.1 73 68.5
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 9.0e-20 100.5 124 44.4
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.2e-19 100.1 112 47.3
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 1.5e-19 99.8 112 47.3
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 3.4e-19 98.6 105 47.6
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 7.7e-19 97.4 127 44.1
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 7.7e-19 97.4 116 44.0
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.0e-18 97.1 112 46.4
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.7e-18 96.3 124 41.9
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 1.7e-18 96.3 121 46.3
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 5.0e-18 94.7 110 43.6
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 5.0e-18 94.7 120 45.8
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 6.5e-18 94.4 112 43.8
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 1.1e-17 93.6 118 43.2
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.1e-17 93.6 122 44.3
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 1.1e-17 93.6 112 43.8
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 1.4e-17 93.2 109 45.9
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 2.5e-17 92.4 125 39.2
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 2.5e-17 92.4 122 43.4
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 2.5e-17 92.4 114 45.6
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 3.2e-17 92.0 121 45.5
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 4.2e-17 91.7 120 43.3
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 4.2e-17 91.7 116 43.1
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 5.5e-17 91.3 109 44.0
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 1.2e-16 90.1 110 41.8
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 1.2e-16 90.1 129 41.1
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 1.6e-16 89.7 126 42.9
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 2.1e-16 89.4 95 49.5
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 6.1e-16 87.8 120 41.7
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 7.9e-16 87.4 58 67.2
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 1.4e-15 86.7 132 39.4
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 1.8e-15 86.3 113 41.6
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 2.3e-15 85.9 111 43.2
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 3.0e-15 85.5 115 43.5
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 3.9e-15 85.1 123 40.7
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 1.1e-14 83.6 130 36.9
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 1.5e-14 83.2 105 41.9
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 2.5e-14 82.4 62 59.7
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 3.3e-14 82.0 121 41.3
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 7.4e-14 80.9 121 39.7
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 9.7e-14 80.5 96 50.0
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 2.8e-13 79.0 83 45.8
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 2.8e-13 79.0 56 60.7
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 2.8e-13 79.0 131 36.6
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 2.8e-13 79.0 130 35.4
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 3.7e-13 78.6 73 53.4
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 4.8e-13 78.2 78 53.8
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 1.1e-12 77.0 106 41.5
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.4e-12 76.6 109 38.5
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 1.8e-12 76.3 120 39.2
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 3.1e-12 75.5 119 39.5
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 4.1e-12 75.1 130 39.2
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 4.1e-12 75.1 127 36.2
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 4.1e-12 75.1 63 60.3
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 4.1e-12 75.1 123 33.3
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 6.9e-12 74.3 111 39.6
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 6.9e-12 74.3 54 61.1
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 1.2e-11 73.6 62 58.1
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 2.6e-11 72.4 107 39.3
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 4.5e-11 71.6 127 40.2
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 1.0e-10 70.5 69 52.2
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 1.3e-10 70.1 71 50.7
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 1.3e-10 70.1 91 41.8
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 1.7e-10 69.7 77 45.5
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 2.2e-10 69.3 107 38.3
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 5.0e-10 68.2 73 47.9
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 6.5e-10 67.8 60 50.0
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 1.1e-09 67.0 68 50.0
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 1.1e-09 67.0 78 44.9
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 1.4e-09 66.6 42 64.3
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 1.4e-09 66.6 115 31.3
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 1.9e-09 66.2 112 34.8
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 2.5e-09 65.9 51 56.9
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 2.5e-09 65.9 109 37.6
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 7.2e-09 64.3 42 61.9
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 1.6e-08 63.2 42 59.5
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 6.1e-08 61.2 55 50.9
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 1.0e-07 60.5 103 35.0
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 2.3e-07 59.3 49 53.1
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 3.0e-07 58.9 83 38.6
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 5.1e-07 58.2 58 43.1
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 3.3e-06 55.5 83 37.3
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 7.4e-06 54.3 45 51.1
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 9.7e-06 53.9 30 83.3


User provided reference genes

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