Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005520 Camellia sinensis var. sinensis HOM05D000213 ORTHO05D000426 2.5e-107 392.1 196 100.0
Dinv13645 Davidia involucrata HOM05D000213 ORTHO05D000426 1.8e-57 226.5 208 64.4
Rhsim13G0125600 Rhododendron simsii HOM05D000213 ORTHO05D000426 1.7e-55 219.9 203 65.5
GSVIVG01021765001 Vitis vinifera HOM05D000213 ORTHO05D000426 2.1e-53 213.0 195 60.5
Actinidia07481 Actinidia chinensis HOM05D000213 ORTHO05D000426 4.6e-53 211.8 201 65.2
TAR624G0671 Trochodendron aralioides HOM05D000213 ORTHO05D000426 1.1e-51 207.2 198 59.6
Actinidia29241 Actinidia chinensis HOM05D000213 ORTHO05D000426 1.6e-50 203.4 198 62.1
vmacro03464 Vaccinium macrocarpon HOM05D000213 ORTHO05D000426 2.1e-50 203.0 209 60.8
CiPaw.09G147900 Carya illinoinensis HOM05D000213 ORTHO05D000426 1.8e-49 199.9 211 55.5
Dinv40939 Davidia involucrata HOM05D000213 ORTHO05D000426 9.9e-48 194.1 197 59.4
QL05p064626 Quercus lobata HOM05D000213 ORTHO05D000426 4.6e-45 185.3 210 53.3
Lj1A1158T19 Lonicera japonica HOM05D000213 ORTHO05D000426 3.9e-44 182.2 205 54.6
Nn7g37776 Nelumbo nucifera HOM05D000213 ORTHO05D000426 1.1e-43 180.6 195 52.8
Cfa000770 Carpinus fangiana HOM05D000213 ORTHO05D000426 1.5e-43 180.3 197 54.8
Haze_05945 Corylus avellana HOM05D000213 ORTHO05D000426 1.5e-43 180.3 199 54.3
Oeu052709.1 Olea europaea HOM05D000213 ORTHO05D000426 4.3e-43 178.7 207 57.5
MBI02_g07699_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000426 1.8e-41 173.3 195 52.3
Gohir.D05G112600 Gossypium hirsutum HOM05D000213 ORTHO05D000426 3.1e-41 172.6 209 53.1
Gorai.009G116800 Gossypium raimondii HOM05D000213 ORTHO05D000426 3.1e-41 172.6 209 53.1
Manes.14G126300 Manihot esculenta HOM05D000213 ORTHO05D000426 4.0e-41 172.2 209 51.2
TAR627G0494 Trochodendron aralioides HOM05D000213 ORTHO05D000426 9.0e-41 171.0 195 52.8
Potri.001G460600 Populus trichocarpa HOM05D000213 ORTHO05D000426 9.9e-40 167.5 216 50.0
Sabra11G0142900 Salix brachista HOM05D000213 ORTHO05D000426 3.8e-39 165.6 216 48.6
Gohir.A05G112200 Gossypium hirsutum HOM05D000213 ORTHO05D000426 4.9e-39 165.2 209 51.7
Manes.06G051300 Manihot esculenta HOM05D000213 ORTHO05D000426 1.9e-38 163.3 209 49.8
Duzib192G0857 Durio zibethinus HOM05D000213 ORTHO05D000426 2.4e-38 162.9 207 51.2
Duzib235G0569 Durio zibethinus HOM05D000213 ORTHO05D000426 2.4e-38 162.9 207 51.2
MSTRG.16307 Avicennia marina HOM05D000213 ORTHO05D000426 3.2e-38 162.5 206 50.0
Eucgr.K01971 Eucalyptus grandis HOM05D000213 ORTHO05D000426 1.2e-37 160.6 198 48.0
MD05G1265200 Malus domestica HOM05D000213 ORTHO05D000426 1.6e-37 160.2 227 46.7
Sabra16G0312300 Salix brachista HOM05D000213 ORTHO05D000426 4.6e-37 158.7 215 48.8
Oeu060326.1 Olea europaea HOM05D000213 ORTHO05D000426 3.9e-36 155.6 203 51.2
Thecc.06G008500 Theobroma cacao HOM05D000213 ORTHO05D000426 5.1e-36 155.2 215 49.8
MD10G1243000 Malus domestica HOM05D000213 ORTHO05D000426 1.9e-35 153.3 224 46.0
Potri.011G157100 Populus trichocarpa HOM05D000213 ORTHO05D000426 2.5e-35 152.9 220 45.5
SalBow8G1308 Salvia bowleyana HOM05D000213 ORTHO05D000426 3.7e-34 149.1 202 49.5
Ciclev10014984m.g Citrus clementina HOM05D000213 ORTHO05D000426 6.2e-34 148.3 226 47.8
Cc09_g07330 Coffea canephora HOM05D000213 ORTHO05D000426 6.2e-34 148.3 206 48.5
RcHm_v2.0_Chr5g0018041 Rosa chinensis HOM05D000213 ORTHO05D000426 2.4e-33 146.4 218 50.5
FvH4_3g11140 Fragaria vesca HOM05D000213 ORTHO05D000426 3.2e-30 136.0 219 48.9
FAN16G1136 Fragaria x ananassa HOM05D000213 ORTHO05D000426 4.2e-30 135.6 214 50.0
Glyma.08G078700 Glycine max HOM05D000213 ORTHO05D000426 4.2e-30 135.6 215 45.6
VMungo0540G1891 Vigna mungo HOM05D000213 ORTHO05D000426 4.2e-30 135.6 230 40.9
Phvul.006G123000 Phaseolus vulgaris HOM05D000213 ORTHO05D000426 5.5e-30 135.2 230 40.9
FAN11G1861 Fragaria x ananassa HOM05D000213 ORTHO05D000426 1.2e-29 134.0 219 49.3
FAN25G0578 Fragaria x ananassa HOM05D000213 ORTHO05D000426 1.6e-29 133.7 218 49.1
Oeu000498.1 Olea europaea HOM05D000213 ORTHO05D000426 6.0e-29 131.7 204 48.5
FAN21G2150 Fragaria x ananassa HOM05D000213 ORTHO05D000426 3.0e-28 129.4 219 47.9
Nitab4.5_0000076g0020 Nicotiana tabacum HOM05D000213 ORTHO05D000426 5.1e-28 128.6 219 47.5
Peaxi162Scf00155g00044 Petunia axillaris HOM05D000213 ORTHO05D000426 6.7e-28 128.3 227 40.1
MBI18_g27140_MAGBIO Magnolia biondii HOM05D000213 ORTHO05D000426 8.7e-28 127.9 199 42.7
Glyma.09G029800 Glycine max HOM05D000213 ORTHO05D000426 4.3e-27 125.6 235 40.0
Oeu063152.1 Olea europaea HOM05D000213 ORTHO05D000426 4.3e-27 125.6 211 45.5
Nitab4.5_0000607g0130 Nicotiana tabacum HOM05D000213 ORTHO05D000426 7.4e-27 124.8 220 44.1
Prupe.4G101100 Prunus persica HOM05D000213 ORTHO05D000426 7.4e-27 124.8 254 36.6
Aqoxy1G01466 Aquilegia oxysepala HOM05D000213 ORTHO05D000426 1.3e-26 124.0 214 44.4
CAN.G39.29 Capsicum annuum HOM05D000213 ORTHO05D000426 4.8e-26 122.1 207 44.9
Lalb_Chr18g0058341 Lupinus albus HOM05D000213 ORTHO05D000426 8.2e-26 121.3 244 42.2
Migut.H01307 Erythranthe guttata HOM05D000213 ORTHO05D000426 1.2e-24 117.5 202 44.1
Glyma.15G135600 Glycine max HOM05D000213 ORTHO05D000426 1.5e-24 117.1 261 36.8
DCAR_007815 Daucus carota HOM05D000213 ORTHO05D000426 2.2e-23 113.2 215 41.9
Glyma.05G123600 Glycine max HOM05D000213 ORTHO05D000426 4.9e-23 112.1 216 40.3
TWI38G0238 Tripterygium wilfordii HOM05D000213 ORTHO05D000426 6.5e-23 111.7 209 46.9
MSTRG.14806 Avicennia marina HOM05D000213 ORTHO05D000426 8.4e-23 111.3 198 40.4
Phvul.002G202000 Phaseolus vulgaris HOM05D000213 ORTHO05D000426 3.2e-22 109.4 208 39.9
PSO675G1755 Papaver somniferum HOM05D000213 ORTHO05D000426 1.2e-21 107.5 228 39.9
Gohir.A10G005800 Gossypium hirsutum HOM05D000213 ORTHO05D000426 1.6e-21 107.1 214 43.0
Gohir.D10G005800 Gossypium hirsutum HOM05D000213 ORTHO05D000426 2.1e-21 106.7 214 43.0
Gorai.011G006600 Gossypium raimondii HOM05D000213 ORTHO05D000426 2.1e-21 106.7 214 43.0
Lalb_Chr20g0120261 Lupinus albus HOM05D000213 ORTHO05D000426 2.1e-21 106.7 235 39.6
PSO541G1260 Papaver somniferum HOM05D000213 ORTHO05D000426 6.0e-21 105.1 228 39.5
TWI63G1118 Tripterygium wilfordii HOM05D000213 ORTHO05D000426 2.3e-20 103.2 209 39.2
SalBow7G0325 Salvia bowleyana HOM05D000213 ORTHO05D000426 5.1e-20 102.1 201 41.8
Lalb_Chr15g0088981 Lupinus albus HOM05D000213 ORTHO05D000426 1.9e-19 100.1 250 38.4
COL.COLO4_26884 Corchorus olitorius HOM05D000213 ORTHO05D000426 3.3e-19 99.4 243 39.5
SGA_v2.0_scaffold1G00295 Striga asiatica HOM05D000213 ORTHO05D000426 3.3e-19 99.4 195 40.5
PGSC0003DMG400015104 Solanum tuberosum HOM05D000213 ORTHO05D000426 5.7e-19 98.6 206 36.4
VMungo0251G2722 Vigna mungo HOM05D000213 ORTHO05D000426 2.8e-18 96.3 216 38.0
AT1G30650 Arabidopsis thaliana HOM05D000213 ORTHO05D000426 6.3e-18 95.1 211 36.5
Cpa.g.sc2011.1 Carica papaya HOM05D000213 ORTHO05D000426 2.4e-17 93.2 204 39.7
Medtr2g032030 Medicago truncatula HOM05D000213 ORTHO05D000426 6.9e-17 91.7 153 43.8
PGR083G0434 Punica granatum HOM05D000213 ORTHO05D000426 6.9e-17 91.7 234 37.2
THA.LOC104798581 Tarenaya hassleriana HOM05D000213 ORTHO05D000426 5.9e-16 88.6 218 33.5
Lj6g0017305 Lotus japonicus HOM05D000213 ORTHO05D000426 1.0e-15 87.8 222 37.4
ATR0763G073 Amborella trichopoda HOM05D000213 ORTHO05D000426 1.3e-15 87.4 218 37.6
BolC7t42005H Brassica oleracea HOM05D000213 ORTHO05D000426 1.4e-14 84.0 209 37.3
Thhalv10007691m.g Eutrema salsugineum HOM05D000213 ORTHO05D000426 1.4e-14 84.0 212 34.9
Sopen02g006270 Solanum pennellii HOM05D000213 ORTHO05D000426 1.4e-14 84.0 199 35.2
TPR.G8036 Trifolium pratense HOM05D000213 ORTHO05D000426 1.4e-14 84.0 153 44.4
Sp1g26550 Schrenkiella parvula HOM05D000213 ORTHO05D000426 2.5e-14 83.2 209 34.9
AL1G44710 Arabidopsis lyrata HOM05D000213 ORTHO05D000426 5.5e-14 82.0 210 36.7
C07p15030 Brassica napus HOM05D000213 ORTHO05D000426 1.2e-13 80.9 204 35.8
Solyc02g021680.3 Solanum lycopersicum HOM05D000213 ORTHO05D000426 2.1e-13 80.1 198 33.3
A07p09760 Brassica napus HOM05D000213 ORTHO05D000426 2.7e-13 79.7 207 35.3
A09p35760 Brassica napus HOM05D000213 ORTHO05D000426 2.7e-13 79.7 210 33.3
BraA09t39099Z Brassica rapa HOM05D000213 ORTHO05D000426 2.7e-13 79.7 210 33.3
BcaB03g13822 Brassica carinata HOM05D000213 ORTHO05D000426 3.6e-13 79.3 203 35.5
Carub.0001s2891 Capsella rubella HOM05D000213 ORTHO05D000426 3.6e-13 79.3 212 36.3
THA.LOC104814342 Tarenaya hassleriana HOM05D000213 ORTHO05D000426 4.6e-13 79.0 217 33.6
BcaC05g27089 Brassica carinata HOM05D000213 ORTHO05D000426 1.0e-12 77.8 210 33.8
C05p29720 Brassica napus HOM05D000213 ORTHO05D000426 1.0e-12 77.8 210 33.8
BolC5t31701H Brassica oleracea HOM05D000213 ORTHO05D000426 1.0e-12 77.8 210 33.8
BraA07t28769Z Brassica rapa HOM05D000213 ORTHO05D000426 1.0e-12 77.8 208 35.1
CARHR030130 Cardamine hirsuta HOM05D000213 ORTHO05D000426 3.9e-12 75.9 210 31.9
AT2G34830 Arabidopsis thaliana HOM05D000213 ORTHO05D000426 8.8e-12 74.7 210 32.4
Sed0009059 Sechium edule HOM05D000213 ORTHO05D000426 2.5e-11 73.2 224 38.4
Atru.chr10.684 Acer truncatum HOM05D000213 ORTHO05D000426 3.3e-11 72.8 229 34.5
Thhalv10016714m.g Eutrema salsugineum HOM05D000213 ORTHO05D000426 9.7e-11 71.2 208 35.1
CARHR128990 Cardamine hirsuta HOM05D000213 ORTHO05D000426 3.7e-10 69.3 214 34.1
CDE04G3309 Ceratophyllum demersum HOM05D000213 ORTHO05D000426 3.7e-10 69.3 195 34.4
CsaV3_1G037680 Cucumis sativus L. HOM05D000213 ORTHO05D000426 4.8e-10 68.9 199 34.2
Sp4g17110 Schrenkiella parvula HOM05D000213 ORTHO05D000426 4.8e-10 68.9 209 34.0
BraA04t18165Z Brassica rapa HOM05D000213 ORTHO05D000426 6.3e-10 68.6 208 31.2
EL10Ac8g19648 Beta vulgaris HOM05D000213 ORTHO05D000426 1.4e-09 67.4 236 29.2
Carub.0004s1651 Capsella rubella HOM05D000213 ORTHO05D000426 1.4e-09 67.4 216 30.1
Psat1g164280 Pisum sativum HOM05D000213 ORTHO05D000426 1.4e-09 67.4 239 32.2
AL4G30850 Arabidopsis lyrata HOM05D000213 ORTHO05D000426 2.4e-09 66.6 211 32.2
ClCG03G008580 Citrullus lanatus HOM05D000213 ORTHO05D000426 3.1e-09 66.2 205 32.7
BcaC02g11565 Brassica carinata HOM05D000213 ORTHO05D000426 5.3e-09 65.5 204 32.4
C04p64020 Brassica napus HOM05D000213 ORTHO05D000426 5.3e-09 65.5 208 30.8
A05p10830 Brassica napus HOM05D000213 ORTHO05D000426 9.1e-09 64.7 209 31.1
BraA05t20028Z Brassica rapa HOM05D000213 ORTHO05D000426 9.1e-09 64.7 209 31.1
BolC4t27876H Brassica oleracea HOM05D000213 ORTHO05D000426 1.2e-08 64.3 209 31.1
Sed0012685 Sechium edule HOM05D000213 ORTHO05D000426 1.2e-08 64.3 209 32.1
BcaB07g32706 Brassica carinata HOM05D000213 ORTHO05D000426 1.5e-08 63.9 206 31.6
Lsat_1_v5_gn_7_29520 Lactuca sativa HOM05D000213 ORTHO05D000426 1.5e-08 63.9 199 34.7
BcaB02g09504 Brassica carinata HOM05D000213 ORTHO05D000426 2.6e-08 63.2 205 35.1
DCAR_005640 Daucus carota HOM05D000213 ORTHO05D000426 2.6e-08 63.2 200 29.0
SGA_v2.0_scaffold223G42880 Striga asiatica HOM05D000213 ORTHO05D000426 2.6e-08 63.2 213 29.1
Aa31LG10G6470 Aethionema arabicum HOM05D000213 ORTHO05D000426 4.5e-08 62.4 240 29.2
C04p13930 Brassica napus HOM05D000213 ORTHO05D000426 4.5e-08 62.4 204 31.9
BolC4t22982H Brassica oleracea HOM05D000213 ORTHO05D000426 4.5e-08 62.4 204 31.9
MELO3C002875.2 Cucumis melo HOM05D000213 ORTHO05D000426 4.5e-08 62.4 208 32.7
arahy.Tifrunner.gnm1.ann1.U9T3UU Arachis hypogaea HOM05D000213 ORTHO05D000426 1.4e-06 57.4 196 31.1
CDE12G0437 Ceratophyllum demersum HOM05D000213 ORTHO05D000426 1.4e-06 57.4 195 31.8


User provided reference genes

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