Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005517 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 1.4e-62 242.7 117 100.0
CSS0016711 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 4.6e-08 61.6 66 53.0
CSS0043871 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 4.6e-08 61.6 66 53.0
Lj3A0G11 Lonicera japonica HOM05D001043 ORTHO05D006432 1.3e-07 60.1 66 48.5
Potri.017G027000 Populus trichocarpa HOM05D001043 ORTHO05D006432 1.3e-07 60.1 33 84.8
Thecc.04G175400 Theobroma cacao HOM05D001043 ORTHO05D006432 1.3e-07 60.1 33 87.9
arahy.Tifrunner.gnm1.ann1.41HRQM Arachis hypogaea HOM05D001043 ORTHO05D006432 1.7e-07 59.7 66 47.0
Manes.11G123700 Manihot esculenta HOM05D001043 ORTHO05D006432 1.7e-07 59.7 48 58.3
Potri.007G130900 Populus trichocarpa HOM05D001043 ORTHO05D006432 2.3e-07 59.3 33 81.8
Duzib212G0937 Durio zibethinus HOM05D001043 ORTHO05D006432 3.0e-07 58.9 74 48.6
QL10p050774 Quercus lobata HOM05D001043 ORTHO05D006432 3.0e-07 58.9 33 84.8
FAN07G1629 Fragaria x ananassa HOM05D001043 ORTHO05D006432 3.9e-07 58.5 33 84.8
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 3.9e-07 58.5 85 42.4
VMungo1127G0978 Vigna mungo HOM05D001043 ORTHO05D006432 3.9e-07 58.5 66 47.0
CiPaw.01G096300 Carya illinoinensis HOM05D001043 ORTHO05D006432 5.1e-07 58.2 33 84.8
Lalb_Chr01g0003101 Lupinus albus HOM05D001043 ORTHO05D006432 6.6e-07 57.8 66 45.5
QL10p050755 Quercus lobata HOM05D001043 ORTHO05D006432 6.6e-07 57.8 33 81.8
Atru.chr4.1261 Acer truncatum HOM05D001043 ORTHO05D006432 8.6e-07 57.4 33 75.8
Dinv44154 Davidia involucrata HOM05D001043 ORTHO05D006432 1.1e-06 57.0 47 63.8
Hma1.2p1_2415F.1_g321710 Hydrangea macrophylla HOM05D001043 ORTHO05D006432 1.1e-06 57.0 33 81.8
Lj3A33G10 Lonicera japonica HOM05D001043 ORTHO05D006432 1.1e-06 57.0 66 47.0
Sabra07G0106300 Salix brachista HOM05D001043 ORTHO05D006432 1.1e-06 57.0 33 78.8
Sc19g0002850 Simmondsia chinensis HOM05D001043 ORTHO05D006432 1.1e-06 57.0 66 47.0
Haze_01462 Corylus avellana HOM05D001043 ORTHO05D006432 1.5e-06 56.6 33 81.8
FvH4_4g10900 Fragaria vesca HOM05D001043 ORTHO05D006432 1.5e-06 56.6 33 81.8
arahy.Tifrunner.gnm1.ann1.AV1GYT Arachis hypogaea HOM05D001043 ORTHO05D006432 1.9e-06 56.2 66 45.5
CiPaw.02G052200 Carya illinoinensis HOM05D001043 ORTHO05D006432 1.9e-06 56.2 33 81.8
Dinv05076 Davidia involucrata HOM05D001043 ORTHO05D006432 1.9e-06 56.2 33 78.8
FAN12G0575 Fragaria x ananassa HOM05D001043 ORTHO05D006432 1.9e-06 56.2 33 81.8
FAN17G1903 Fragaria x ananassa HOM05D001043 ORTHO05D006432 1.9e-06 56.2 33 81.8
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 1.9e-06 56.2 66 45.5
Oeu022683.1 Olea europaea HOM05D001043 ORTHO05D006432 1.9e-06 56.2 33 84.8
Actinidia26504 Actinidia chinensis HOM05D001043 ORTHO05D006432 2.5e-06 55.8 33 81.8
Medtr4g068130 Medicago truncatula HOM05D001043 ORTHO05D006432 2.5e-06 55.8 34 73.5
GSVIVG01010839001 Vitis vinifera HOM05D001043 ORTHO05D006432 3.3e-06 55.5 33 78.8
CAN.G136.20 Capsicum annuum HOM05D001043 ORTHO05D006432 4.3e-06 55.1 74 44.6
Duzib268G1183 Durio zibethinus HOM05D001043 ORTHO05D006432 4.3e-06 55.1 33 81.8
Glyma.12G051100 Glycine max HOM05D001043 ORTHO05D006432 4.3e-06 55.1 66 47.0
Lsat_1_v5_gn_3_125361 Lactuca sativa HOM05D001043 ORTHO05D006432 4.3e-06 55.1 66 47.0
MD04G1044900 Malus domestica HOM05D001043 ORTHO05D006432 4.3e-06 55.1 33 78.8
SGA_v2.0_scaffold12G06170 Striga asiatica HOM05D001043 ORTHO05D006432 4.3e-06 55.1 33 78.8
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 5.6e-06 54.7 26 92.3
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 5.6e-06 54.7 26 92.3
Ca_20798_v3 Cicer arietinum L. HOM05D001043 ORTHO05D006432 5.6e-06 54.7 33 78.8
Lj3g0012550 Lotus japonicus HOM05D001043 ORTHO05D006432 5.6e-06 54.7 66 45.5
MBI07_g18520_MAGBIO Magnolia biondii HOM05D001043 ORTHO05D006432 5.6e-06 54.7 66 45.5
Ah.04g153480 Amaranthus hybridus HOM05D001043 ORTHO05D006432 7.3e-06 54.3 33 75.8
Cc03_g12190 Coffea canephora HOM05D001043 ORTHO05D006432 9.5e-06 53.9 74 44.6
Oeu027753.1 Olea europaea HOM05D001043 ORTHO05D006432 9.5e-06 53.9 74 44.6
SalBow3G1676 Salvia bowleyana HOM05D001043 ORTHO05D006432 9.5e-06 53.9 48 56.2
SalBow3G2442 Salvia bowleyana HOM05D001043 ORTHO05D006432 9.5e-06 53.9 48 56.2
SalBow3G3815 Salvia bowleyana HOM05D001043 ORTHO05D006432 9.5e-06 53.9 48 56.2


User provided reference genes

Program Settings