Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.3e-255 885.9 456 100.0
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.7e-255 885.6 456 99.8
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 5.7e-232 807.4 461 91.8
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 3.0e-228 795.0 456 90.6
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 6.2e-226 787.3 458 89.7
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.4e-224 781.2 474 85.4
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 7.5e-224 780.4 455 85.7
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 9.8e-224 780.0 474 84.0
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 2.9e-223 778.5 456 86.2
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 6.4e-223 777.3 456 88.6
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.1e-222 776.5 457 85.3
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 4.1e-222 774.6 457 86.0
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.6e-221 772.7 457 86.0
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 3.0e-220 768.5 456 83.6
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 8.6e-220 766.9 457 84.2
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.5e-219 765.4 457 84.0
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 3.3e-219 765.0 456 84.4
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 7.3e-219 763.8 456 84.2
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 9.5e-219 763.5 456 86.8
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 9.5e-219 763.5 463 85.3
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 2.8e-218 761.9 456 84.2
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 6.2e-218 760.8 456 83.6
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 8.1e-218 760.4 458 83.4
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.8e-217 759.2 463 83.6
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 3.4e-216 755.0 472 81.1
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 5.8e-216 754.2 458 85.8
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.7e-215 752.7 456 83.1
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 6.4e-215 750.7 460 81.7
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.4e-214 749.6 457 84.0
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 7.1e-214 747.3 453 82.1
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.2e-213 746.5 455 83.1
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 1.6e-213 746.1 474 83.3
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 2.7e-213 745.3 456 82.7
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 7.8e-213 743.8 456 81.8
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 5.1e-212 741.1 459 82.8
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 8.6e-212 740.3 456 81.6
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 8.6e-212 740.3 456 82.0
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.1e-211 740.0 456 81.8
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.9e-211 739.2 457 83.2
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.9e-211 739.2 454 82.4
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.5e-211 738.8 461 81.6
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 3.3e-211 738.4 456 82.2
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 4.3e-211 738.0 456 80.5
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 4.3e-211 738.0 457 82.7
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 9.5e-211 736.9 457 83.2
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 9.5e-211 736.9 458 81.4
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 1.6e-210 736.1 461 81.1
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 2.8e-210 735.3 458 81.4
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.8e-210 735.3 455 81.8
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 8.1e-210 733.8 459 81.5
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.1e-209 733.4 522 76.2
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.1e-209 733.4 457 80.7
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 1.4e-209 733.0 459 81.9
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 2.3e-209 732.3 457 82.1
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 4.0e-209 731.5 462 83.5
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 4.4e-208 728.0 462 83.3
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 9.9e-208 726.9 458 80.8
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.3e-207 726.5 451 82.3
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 1.4e-206 723.0 433 83.6
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 5.4e-206 721.1 457 82.3
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 7.1e-206 720.7 433 83.1
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.6e-205 719.5 459 78.9
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 2.7e-205 718.8 458 79.3
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 2.7e-205 718.8 454 79.7
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 6.0e-205 717.6 432 82.2
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 1.3e-204 716.5 431 82.8
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 1.5e-203 713.0 458 79.0
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 1.2e-202 709.9 454 79.3
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.1e-202 709.1 443 81.0
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 2.1e-202 709.1 457 78.6
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.8e-201 706.1 455 79.3
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 1.8e-201 706.1 455 79.3
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 2.6e-200 702.2 457 77.7
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 3.4e-200 701.8 457 79.0
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 7.6e-200 700.7 457 78.8
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 2.2e-199 699.1 457 79.9
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 2.1e-197 692.6 458 79.3
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 4.6e-197 691.4 454 82.4
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 2.3e-196 689.1 454 76.0
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 2.3e-196 689.1 382 88.7
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 5.1e-196 688.0 469 79.5
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 6.6e-196 687.6 464 77.2
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 7.3e-195 684.1 362 92.5
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.1e-193 680.2 457 77.0
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 6.9e-193 677.6 457 77.7
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 2.6e-192 675.6 387 84.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.1e-189 666.0 357 91.9
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 3.4e-184 648.7 455 74.3
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 1.4e-182 643.3 358 87.2
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.6e-178 629.8 380 80.3
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 2.8e-178 629.0 332 93.4
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 5.7e-171 604.7 332 89.2
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.9e-164 582.0 453 69.8
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 6.7e-164 581.3 418 78.0
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 2.8e-162 575.9 382 71.7
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 4.8e-162 575.1 384 72.4
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 1.1e-161 573.9 356 82.0
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 9.1e-161 570.9 383 73.1
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 5.0e-159 565.1 360 80.3
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 9.7e-155 550.8 381 69.8
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 2.1e-149 533.1 283 91.9
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.6e-144 516.9 279 90.7
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 2.5e-142 509.6 315 85.7
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 9.7e-139 497.7 315 79.0
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 6.3e-138 495.0 405 62.5
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 6.1e-133 478.4 432 62.3
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 8.0e-133 478.0 321 75.4
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.3e-127 460.7 236 94.1
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.3e-127 460.7 236 94.1
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.3e-127 460.7 332 72.9
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.5e-126 457.2 418 60.0
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 5.0e-111 405.6 412 49.8
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 6.6e-95 352.1 242 77.7
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-76 291.6 318 47.2
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.8e-63 247.7 337 43.0
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 5.3e-60 236.1 402 37.1
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 9.0e-52 208.8 395 35.9
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.0e-51 207.6 341 36.7
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.8e-50 203.4 117 85.5
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-49 201.8 349 35.2
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 1.6e-48 198.0 151 68.2
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 8.8e-47 192.2 102 90.2
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.8e-44 184.5 152 71.7
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.2e-43 181.8 100 90.0
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.0e-43 181.0 362 31.8
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 7.4e-38 162.5 92 90.2
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 8.3e-21 105.9 51 88.2
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.2e-16 92.0 92 55.4
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 1.4e-15 88.6 63 77.8
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 7.2e-09 66.2 38 86.8
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.6e-08 65.1 42 78.6
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 6.1e-08 63.2 150 28.7


User provided reference genes

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