Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 6.1e-149 530.8 270 100.0
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 6.8e-148 527.3 270 98.9
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 3.1e-108 395.6 268 75.4
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 3.4e-107 392.1 268 76.1
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 4.2e-105 385.2 266 74.1
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 7.1e-105 384.4 266 73.3
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.3e-103 379.4 274 71.2
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 9.3e-97 357.5 268 70.5
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 6.7e-95 351.3 266 66.5
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 4.8e-93 345.1 267 65.9
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 1.2e-91 340.5 266 65.4
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 4.5e-91 338.6 268 63.8
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 1.1e-89 334.0 268 64.2
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 2.7e-88 329.3 268 62.7
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 1.8e-87 326.6 268 62.7
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.9e-87 325.5 266 61.3
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 1.1e-86 323.9 268 61.9
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 3.3e-86 322.4 266 60.2
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 4.3e-86 322.0 268 61.9
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 5.7e-86 321.6 266 60.5
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 4.1e-84 315.5 264 59.1
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 5.3e-84 315.1 268 61.6
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 1.2e-83 313.9 266 60.5
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 2.6e-83 312.8 266 60.2
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 3.4e-83 312.4 268 60.1
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 4.5e-83 312.0 268 60.8
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 5.9e-83 311.6 268 58.2
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 7.7e-83 311.2 268 58.6
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 7.7e-83 311.2 268 58.2
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 2.9e-82 309.3 266 59.4
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 2.9e-82 309.3 268 59.0
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.8e-82 308.9 266 60.2
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 1.9e-81 306.6 266 59.8
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 5.5e-81 305.1 264 60.2
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 7.2e-81 304.7 266 58.3
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 1.6e-80 303.5 268 57.8
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 1.4e-79 300.4 245 65.3
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 5.1e-79 298.5 266 57.1
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.5e-78 297.0 268 57.5
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 3.3e-78 295.8 268 54.9
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 4.3e-78 295.4 268 57.5
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 5.7e-78 295.0 266 55.6
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 9.7e-78 294.3 271 57.9
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 9.7e-78 294.3 268 57.1
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.3e-77 293.9 268 57.1
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.2e-77 293.1 268 57.1
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 2.2e-77 293.1 286 56.6
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 2.2e-77 293.1 266 57.1
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 6.3e-77 291.6 268 57.5
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.1e-76 290.8 268 56.7
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.8e-76 290.0 268 57.1
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.2e-75 287.3 268 55.6
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 1.5e-75 287.0 267 56.9
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 5.9e-75 285.0 267 56.9
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 2.2e-74 283.1 268 53.4
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 2.2e-74 283.1 268 54.9
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 5.0e-74 282.0 268 53.4
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 8.5e-74 281.2 268 56.0
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.4e-73 280.4 281 54.8
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 4.2e-73 278.9 268 55.2
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 4.2e-73 278.9 388 43.0
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 4.2e-73 278.9 268 54.5
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 2.1e-72 276.6 268 53.7
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 2.7e-72 276.2 266 54.1
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 3.6e-72 275.8 270 55.6
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 3.6e-72 275.8 270 55.6
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 6.1e-72 275.0 298 51.7
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 1.0e-71 274.2 267 52.4
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 1.4e-71 273.9 268 53.4
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.1e-70 270.8 268 53.7
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 1.5e-70 270.4 250 57.2
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 2.6e-70 269.6 268 51.9
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 8.2e-69 264.6 266 51.9
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.8e-68 263.5 268 50.4
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.5e-67 260.4 266 51.1
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 3.2e-65 252.7 267 48.7
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 3.2e-65 252.7 267 48.7
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 9.4e-65 251.1 267 48.3
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 9.4e-65 251.1 267 48.3
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 4.7e-64 248.8 268 47.8
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 2.3e-63 246.5 267 48.7
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 2.0e-62 243.4 269 47.6
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 9.7e-62 241.1 267 47.9
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 9.7e-62 241.1 263 47.9
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 8.2e-61 238.0 267 46.1
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 3.1e-60 236.1 263 48.7
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 1.2e-59 234.2 267 45.7
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 5.9e-59 231.9 267 46.1
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 2.9e-58 229.6 267 46.4
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 5.0e-58 228.8 267 46.4
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 3.2e-57 226.1 267 45.3
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 5.5e-57 225.3 250 47.6
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 5.7e-54 215.3 246 50.0
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 9.8e-54 214.5 275 46.2
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 2.2e-53 213.4 171 66.7
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 2.2e-53 213.4 192 56.8
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 9.1e-52 208.0 196 56.1
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 3.5e-51 206.1 196 56.6
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 1.7e-50 203.8 267 43.1
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 3.8e-50 202.6 262 41.6
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 9.8e-46 188.0 269 40.5
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.6e-35 154.1 112 67.0
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 8.6e-34 148.3 259 35.5
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.0e-31 141.4 134 57.5
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.4e-28 131.0 271 28.0
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 3.2e-12 76.6 47 74.5
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 7.3e-09 65.5 62 50.0


User provided reference genes

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