Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005479 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 2.2e-103 379.0 200 100.0
CSS0041118 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 1.8e-97 359.4 194 97.4
Actinidia03741 Actinidia chinensis HOM05D008415 ORTHO05D010601 7.5e-51 204.5 197 63.5
Rhsim01G0218700 Rhododendron simsii HOM05D008415 ORTHO05D010601 1.1e-49 200.7 207 59.4
vmacro14451 Vaccinium macrocarpon HOM05D008415 ORTHO05D010601 5.5e-46 188.3 209 56.0
Dinv32770 Davidia involucrata HOM05D008415 ORTHO05D010601 5.9e-40 168.3 198 53.5
TAR633G1891 Trochodendron aralioides HOM05D008415 ORTHO05D010601 2.3e-36 156.4 217 46.1
GSVIVG01025161001 Vitis vinifera HOM05D008415 ORTHO05D010601 3.0e-36 156.0 191 48.2
Nitab4.5_0000650g0050 Nicotiana tabacum HOM05D008415 ORTHO05D010601 1.1e-33 147.5 204 46.6
QL01p023166 Quercus lobata HOM05D008415 ORTHO05D010601 1.4e-33 147.1 205 47.8
Peaxi162Scf00351g00214 Petunia axillaris HOM05D008415 ORTHO05D010601 2.4e-33 146.4 203 45.8
Haze_23892 Corylus avellana HOM05D008415 ORTHO05D010601 1.6e-32 143.7 192 51.0
Cc01_g11390 Coffea canephora HOM05D008415 ORTHO05D010601 3.5e-32 142.5 199 46.2
PGSC0003DMG400008064 Solanum tuberosum HOM05D008415 ORTHO05D010601 7.8e-32 141.4 201 45.3
Solyc11g069210.2 Solanum lycopersicum HOM05D008415 ORTHO05D010601 1.0e-31 141.0 201 45.8
MSTRG.18650 Avicennia marina HOM05D008415 ORTHO05D010601 2.3e-31 139.8 204 44.6
Oeu059099.1 Olea europaea HOM05D008415 ORTHO05D010601 1.9e-30 136.7 213 43.2
SalBow3G0300 Salvia bowleyana HOM05D008415 ORTHO05D010601 7.3e-30 134.8 205 43.9
Lsat_1_v5_gn_2_98161 Lactuca sativa HOM05D008415 ORTHO05D010601 1.6e-29 133.7 201 44.3
CAN.G631.8 Capsicum annuum HOM05D008415 ORTHO05D010601 6.2e-29 131.7 200 46.5
Migut.D02196 Erythranthe guttata HOM05D008415 ORTHO05D010601 8.0e-29 131.3 200 47.5
Sopen11g027940 Solanum pennellii HOM05D008415 ORTHO05D010601 5.2e-28 128.6 201 43.8
ECA238G2082 Erigeron canadensis HOM05D008415 ORTHO05D010601 1.7e-26 123.6 193 43.0
CsaV3_6G021730 Cucumis sativus L. HOM05D008415 ORTHO05D010601 1.1e-25 120.9 200 42.5
MELO3C025762.2 Cucumis melo HOM05D008415 ORTHO05D010601 1.4e-25 120.6 200 42.5
Sed0001336 Sechium edule HOM05D008415 ORTHO05D010601 2.4e-25 119.8 192 44.8
PGR119G0199 Punica granatum HOM05D008415 ORTHO05D010601 4.1e-25 119.0 154 47.4
SGA_v2.0_scaffold61G21159 Striga asiatica HOM05D008415 ORTHO05D010601 7.8e-24 114.8 176 42.0
ClCG02G021040 Citrullus lanatus HOM05D008415 ORTHO05D010601 1.0e-23 114.4 199 41.2
HanXRQChr14g0445691 Helianthus annuus HOM05D008415 ORTHO05D010601 3.9e-23 112.5 198 42.4
Glyma.12G070700 Glycine max HOM05D008415 ORTHO05D010601 8.6e-23 111.3 190 41.1
Psat7g223880 Pisum sativum HOM05D008415 ORTHO05D010601 3.3e-22 109.4 199 40.2
Glyma.11G154841 Glycine max HOM05D008415 ORTHO05D010601 5.6e-22 108.6 196 39.8
Eucgr.J00943 Eucalyptus grandis HOM05D008415 ORTHO05D010601 6.2e-21 105.1 265 34.0
CiPaw.14G078500 Carya illinoinensis HOM05D008415 ORTHO05D010601 1.1e-20 104.4 105 56.2
unitig_46.g18232 Utricularia gibba HOM05D008415 ORTHO05D010601 8.9e-20 101.3 182 39.0
VMungo1127G1728 Vigna mungo HOM05D008415 ORTHO05D010601 9.9e-19 97.8 162 42.6
Hma1.2p1_1931F.1_g307990 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 1.7e-18 97.1 394 27.4
Hma1.2p1_2585F.1_g324920 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 1.7e-18 97.1 394 27.4
Lalb_Chr19g0137361 Lupinus albus HOM05D008415 ORTHO05D010601 2.2e-18 96.7 192 37.0
Lj3g0013437 Lotus japonicus HOM05D008415 ORTHO05D010601 4.9e-18 95.5 186 38.2
Medtr4g060050 Medicago truncatula HOM05D008415 ORTHO05D010601 5.4e-17 92.0 191 36.1
arahy.Tifrunner.gnm1.ann1.TY33PY Arachis hypogaea HOM05D008415 ORTHO05D010601 4.6e-16 89.0 187 39.6
arahy.Tifrunner.gnm1.ann1.C7LIDW Arachis hypogaea HOM05D008415 ORTHO05D010601 7.8e-16 88.2 187 39.6
Ca_19250_v3 Cicer arietinum L. HOM05D008415 ORTHO05D010601 1.1e-14 84.3 73 54.8
CANSAT54G1687 Cannabis sativa HOM05D008415 ORTHO05D010601 1.5e-14 84.0 195 32.8
TPR.G15532 Trifolium pratense HOM05D008415 ORTHO05D010601 4.0e-12 75.9 76 48.7
Aqoxy2G01080 Aquilegia oxysepala HOM05D008415 ORTHO05D010601 5.8e-11 72.0 52 61.5
Phvul.011G073700 Phaseolus vulgaris HOM05D008415 ORTHO05D010601 4.9e-10 68.9 43 67.4
Os03g0288900 Oryza sativa ssp. japonica HOM05D008415 ORTHO05D010601 8.4e-10 68.2 107 39.3
SEGI_01090 Sequoiadendron giganteum HOM05D005535 ORTHO05D006753 6.6e-07 58.5 172 30.2
Cc07_g02980 Coffea canephora HOM05D008415 ORTHO05D010601 1.9e-06 57.0 41 65.9
Gohir.A12G175600 Gossypium hirsutum HOM05D005535 ORTHO05D006753 3.3e-06 56.2 67 47.8
Gohir.D12G178800 Gossypium hirsutum HOM05D005535 ORTHO05D006753 3.3e-06 56.2 67 47.8
Gorai.008G191600 Gossypium raimondii HOM05D005535 ORTHO05D006753 3.3e-06 56.2 67 47.8
Potri.016G129250 Populus trichocarpa HOM05D008415 ORTHO05D010601 3.3e-06 56.2 177 28.8


User provided reference genes

Program Settings