Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.4e-90 336.3 169 100.0
CSS0007512 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 7.4e-68 260.8 147 89.8
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.4e-26 121.7 154 44.2
Rhsim08G0065500 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.6e-25 120.2 143 47.6
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.6e-25 120.2 140 45.7
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.7e-25 119.4 140 45.7
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 1.3e-24 117.1 149 42.3
Rhsim08G0065900 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.9e-24 115.5 141 46.8
Rhsim08G0066000 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.9e-24 115.5 140 47.9
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 2.5e-23 112.8 141 46.8
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 2.5e-23 112.8 141 46.8
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.6e-22 110.2 142 44.4
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.1e-22 109.8 138 44.9
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.6e-22 109.0 140 44.3
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 6.8e-21 104.8 129 45.0
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.4e-20 102.4 142 42.3
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 8.6e-16 87.8 110 46.4
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 1.1e-15 87.4 132 37.1
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 1.5e-15 87.0 142 38.7
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 3.3e-15 85.9 138 38.4
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 7.3e-15 84.7 120 40.0
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 4.7e-14 82.0 150 32.7
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 4.7e-14 82.0 150 32.7
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 3.1e-13 79.3 150 32.7
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 3.1e-13 79.3 150 32.7
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 4.0e-13 79.0 150 32.7
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 7.5e-12 74.7 136 35.3
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.7e-11 73.6 146 31.5
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.9e-11 72.8 137 32.1
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 4.9e-11 72.0 133 36.8
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 1.1e-10 70.9 135 34.8
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 1.4e-10 70.5 135 31.1
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 2.4e-10 69.7 107 40.2
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 2.4e-10 69.7 136 31.6
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 5.4e-10 68.6 115 35.7
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 7.1e-10 68.2 131 35.1
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 7.1e-10 68.2 144 29.9
Gorai.007G297900 Gossypium raimondii HOM05D008333 ORTHO05D010371 4.6e-09 65.5 122 32.0
Sopen04g006510 Solanum pennellii HOM05D008333 ORTHO05D010371 4.6e-09 65.5 115 33.9
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 6.0e-09 65.1 131 34.4
Gohir.D11G275775 Gossypium hirsutum HOM05D008333 ORTHO05D010371 6.0e-09 65.1 122 32.0
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 6.0e-09 65.1 146 30.8
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 6.0e-09 65.1 149 30.2
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.0e-08 64.3 129 34.9
Lsat_1_v5_gn_4_179800 Lactuca sativa HOM05D019919 ORTHO05D010371 1.3e-08 63.9 104 32.7
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.3e-08 63.9 78 39.7
Gohir.A11G265601 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.7e-08 63.5 99 35.4
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 8.6e-08 61.2 112 34.8
Lsat_1_v5_gn_4_179820 Lactuca sativa HOM05D019919 ORTHO05D010371 6.2e-06 55.1 128 28.9


User provided reference genes

Program Settings