Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005463 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 2.1e-32 142.1 91 100.0
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 1.3e-18 96.3 89 58.4
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 1.8e-12 75.9 94 55.3
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 1.8e-12 75.9 91 50.5
DCAR_019271 Daucus carota HOM05D007037 ORTHO05D006691 6.9e-12 73.9 87 49.4
CiPaw.03G159600 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.5e-11 72.8 87 51.7
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.5e-11 72.8 94 47.9
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 1.7e-10 69.3 82 46.3
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 2.9e-10 68.6 92 47.8
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 5.0e-10 67.8 92 45.7
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 6.5e-10 67.4 90 46.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 1.1e-09 66.6 92 43.5
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 1.9e-09 65.9 94 41.5
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.5e-09 65.5 90 45.6
Os03g0574600 Oryza sativa ssp. japonica HOM05D007037 ORTHO05D006691 2.5e-09 65.5 88 64.8
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 5.5e-09 64.3 93 41.9
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 5.5e-09 64.3 91 42.9
ECA236G1425 Erigeron canadensis HOM05D007037 ORTHO05D006691 7.2e-09 63.9 82 56.1
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 7.2e-09 63.9 91 41.8
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 1.2e-08 63.2 89 42.7
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 1.6e-08 62.8 90 45.6
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 2.1e-08 62.4 94 41.5
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 2.1e-08 62.4 94 39.4
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 3.6e-08 61.6 90 40.0
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 4.7e-08 61.2 91 41.8
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 6.1e-08 60.8 91 40.7
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 6.1e-08 60.8 91 40.7
Rhsim04G0053000 Rhododendron simsii HOM05D007037 ORTHO05D006691 1.0e-07 60.1 74 48.6
HPP92_026447 Vanilla planifolia HOM05D009550 ORTHO05D006691 1.4e-07 59.7 89 39.3
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 2.3e-07 58.9 94 38.3
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 3.0e-07 58.5 95 37.9
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 3.0e-07 58.5 103 36.9
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 3.9e-07 58.2 95 37.9
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 8.8e-07 57.0 83 41.0
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.1e-06 56.6 92 40.2
Sabra14G0116400 Salix brachista HOM05D009550 ORTHO05D006691 1.5e-06 56.2 94 45.7
CSS0014397 Camellia sinensis var. sinensis HOM05D009550 ORTHO05D006691 2.0e-06 55.8 89 60.7
CSS0027630 Camellia sinensis var. sinensis HOM05D009550 ORTHO05D006691 2.0e-06 55.8 89 60.7
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 2.0e-06 55.8 91 38.5
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 3.3e-06 55.1 91 37.4
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.3e-06 55.1 96 37.5
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 7.4e-06 53.9 98 35.7
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 9.7e-06 53.5 90 38.9
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 9.7e-06 53.5 92 37.0
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 9.7e-06 53.5 95 37.9


User provided reference genes

Program Settings