Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005428 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.0e-115 418.7 235 100.0
CSS0050093 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.4e-56 223.0 184 78.3
CSS0027719 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-50 204.1 188 71.3
CSS0025712 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.7e-42 175.3 182 69.2
CSS0009426 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.6e-12 76.3 53 69.8
CSS0038075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.7e-12 75.9 53 69.8
CSS0010680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.1e-11 73.2 53 67.9
CSS0040342 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.1e-11 73.2 53 67.9
TAR331G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.0e-10 70.5 84 47.6
CSS0039380 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-10 70.1 53 66.0
CSS0044845 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.8e-10 68.9 49 65.3
CANSAT01G2546 Cannabis sativa HOM05D000034 ORTHO05D000037 1.7e-09 67.4 54 61.1
CANSAT25G1613 Cannabis sativa HOM05D000034 ORTHO05D000037 1.7e-09 67.4 54 61.1
CANSAT25G1047 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-09 67.0 63 52.4
CANSAT25G2314 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-09 67.0 63 52.4
CANSAT54G1197 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-09 67.0 63 52.4
CANSAT54G2552 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-09 67.0 63 52.4
PSO063G6922 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-09 67.0 67 52.2
PSO210G4967 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-09 67.0 67 52.2
PSO210G6866 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-09 67.0 67 52.2
Prupe.1G096200 Prunus persica HOM05D000034 ORTHO05D000037 2.9e-09 66.6 150 32.0
PSO170G2012 Papaver somniferum HOM05D000034 ORTHO05D000037 3.7e-09 66.2 67 52.2
PSO386G0107 Papaver somniferum HOM05D000034 ORTHO05D000037 3.7e-09 66.2 67 52.2
PSO675G0791 Papaver somniferum HOM05D000034 ORTHO05D000037 3.7e-09 66.2 67 52.2
PSO700G0240 Papaver somniferum HOM05D000034 ORTHO05D000037 3.7e-09 66.2 67 52.2
Lj3g0012091 Lotus japonicus HOM05D000034 ORTHO05D000037 4.9e-09 65.9 101 42.6
RcHm_v2.0_Chr1g0354781 Rosa chinensis HOM05D000034 ORTHO05D000037 4.9e-09 65.9 41 73.2
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 6.4e-09 65.5 45 62.2
CANSAT01G0970 Cannabis sativa HOM05D000034 ORTHO05D000037 8.3e-09 65.1 63 50.8
Lj3g0012180 Lotus japonicus HOM05D000034 ORTHO05D000037 1.1e-08 64.7 101 42.6
PSO724G0660 Papaver somniferum HOM05D000034 ORTHO05D000037 1.1e-08 64.7 67 50.7
Aqoxy4G01435 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.4e-08 64.3 55 60.0
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.4e-08 64.3 55 60.0
CANSAT21G1727 Cannabis sativa HOM05D000034 ORTHO05D000037 1.4e-08 64.3 47 63.8
AUR62037954 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.4e-08 63.5 67 50.7
CANSAT11G1962 Cannabis sativa HOM05D000034 ORTHO05D000037 3.2e-08 63.2 59 50.8
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.1e-08 62.8 52 55.8
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.1e-08 62.8 52 55.8
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.1e-08 62.8 52 55.8
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.1e-08 62.8 52 55.8
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.1e-08 62.8 52 55.8
PSO017G6287 Papaver somniferum HOM05D000034 ORTHO05D000037 4.1e-08 62.8 67 50.7
CSS0041691 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.4e-08 62.4 54 51.9
CANSAT64G2284 Cannabis sativa HOM05D000034 ORTHO05D000037 5.4e-08 62.4 45 64.4
TWI09G0723 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.4e-08 62.4 46 63.0
arahy.Tifrunner.gnm1.ann1.650AVT Arachis hypogaea HOM05D000034 ORTHO05D000037 7.0e-08 62.0 63 52.4
LjContig00141g0023111 Lotus japonicus HOM05D000034 ORTHO05D000037 7.0e-08 62.0 68 51.5
CANSAT01G1210 Cannabis sativa HOM05D000034 ORTHO05D000037 9.2e-08 61.6 47 61.7
Lj1g0002194 Lotus japonicus HOM05D000034 ORTHO05D000037 9.2e-08 61.6 59 52.5
SHI14674 Sapria himalayana HOM05D000034 ORTHO05D000037 9.2e-08 61.6 47 55.3
TWI73G1226 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.2e-08 61.6 43 67.4
TWI74G1293 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.2e-08 61.6 43 67.4
arahy.Tifrunner.gnm1.ann1.FCT25S Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-07 60.8 63 50.8
arahy.Tifrunner.gnm1.ann1.MPB7DX Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-07 60.8 63 52.4
arahy.Tifrunner.gnm1.ann1.RU9D2T Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-07 60.8 53 58.5
CSS0015900 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.6e-07 60.8 52 53.8
PSO832G2050 Papaver somniferum HOM05D000034 ORTHO05D000037 1.6e-07 60.8 67 49.3
Aqoxy7G02254 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.0e-07 60.5 52 51.9
CSS0041293 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.0e-07 60.5 52 53.8
PGR083G1397 Punica granatum HOM05D000034 ORTHO05D000037 2.0e-07 60.5 39 71.8
arahy.Tifrunner.gnm1.ann1.8AJD73 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-07 60.1 53 60.4
MBI19_g00241_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.7e-07 60.1 48 56.2
TWI12G0430 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.7e-07 60.1 50 58.0
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.7e-07 60.1 67 49.3
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.7e-07 60.1 46 60.9
Atru.chr5.2512 Acer truncatum HOM05D000034 ORTHO05D000037 3.5e-07 59.7 41 68.3
CSS0001254 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.5e-07 59.7 52 53.8
MBI03_g22538_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.5e-07 59.7 75 44.0
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 4.6e-07 59.3 35 77.1
CANSAT64G1448 Cannabis sativa HOM05D000034 ORTHO05D000037 4.6e-07 59.3 66 50.0
CANSAT80G1286 Cannabis sativa HOM05D000034 ORTHO05D000037 4.6e-07 59.3 65 52.3
ECA232G0123 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.6e-07 59.3 50 58.0
QL01p050021 Quercus lobata HOM05D000034 ORTHO05D000037 4.6e-07 59.3 54 59.3
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 4.6e-07 59.3 47 68.1
Atru.chr10.353 Acer truncatum HOM05D000034 ORTHO05D000037 6.0e-07 58.9 41 68.3
arahy.Tifrunner.gnm1.ann1.DIK1RJ Arachis hypogaea HOM05D000034 ORTHO05D000037 6.0e-07 58.9 47 61.7
CANSAT78G0128 Cannabis sativa HOM05D000034 ORTHO05D000037 6.0e-07 58.9 47 59.6
MELO3C034964.2 Cucumis melo HOM05D000034 ORTHO05D000037 6.0e-07 58.9 55 50.9
QL08p024725 Quercus lobata HOM05D000034 ORTHO05D000037 6.0e-07 58.9 45 66.7
Aqoxy5G02543 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.8e-07 58.5 44 59.1
Aqoxy7G01723 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.8e-07 58.5 58 48.3
Duzib187G1082 Durio zibethinus HOM05D000034 ORTHO05D000037 7.8e-07 58.5 35 74.3
Oeu015491.1 Olea europaea HOM05D000034 ORTHO05D000037 7.8e-07 58.5 43 65.1
QL02p080045 Quercus lobata HOM05D000034 ORTHO05D000037 7.8e-07 58.5 60 46.7
SHI20335 Sapria himalayana HOM05D000034 ORTHO05D000037 7.8e-07 58.5 47 57.4
TWI23G0349 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.8e-07 58.5 46 60.9
Atru.chr4.1236 Acer truncatum HOM05D000034 ORTHO05D000037 1.0e-06 58.2 41 65.9
arahy.Tifrunner.gnm1.ann1.F8S6LB Arachis hypogaea HOM05D000034 ORTHO05D000037 1.0e-06 58.2 63 49.2
CSS0004838 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-06 58.2 52 51.9
ECA246G0804 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.0e-06 58.2 37 67.6
PGR042G2378 Punica granatum HOM05D000034 ORTHO05D000037 1.0e-06 58.2 51 56.9
Aqoxy6G01842 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.3e-06 57.8 59 50.8
arahy.Tifrunner.gnm1.ann1.B6EI28 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 63 49.2
arahy.Tifrunner.gnm1.ann1.EQ53E4 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 53 58.5
arahy.Tifrunner.gnm1.ann1.ES6UTP Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 53 58.5
arahy.Tifrunner.gnm1.ann1.H0SGIW Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 53 58.5
arahy.Tifrunner.gnm1.ann1.H7NW57 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 35 74.3
arahy.Tifrunner.gnm1.ann1.HQ0KDL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 53 58.5
arahy.Tifrunner.gnm1.ann1.S3JL1H Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 53 58.5
Hma1.2p1_0358F.1_g134740 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-06 57.8 37 70.3
MBI16_g14986_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.3e-06 57.8 35 74.3
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 1.3e-06 57.8 47 66.0
FvH4_2g04530 Fragaria vesca HOM05D000034 ORTHO05D000037 1.7e-06 57.4 80 45.0
FvH4_2g11121 Fragaria vesca HOM05D000034 ORTHO05D000037 1.7e-06 57.4 80 45.0
Oeu011781.1 Olea europaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 51 56.9
Oeu017244.1 Olea europaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 51 56.9
PGR142G3889 Punica granatum HOM05D000034 ORTHO05D000037 1.7e-06 57.4 37 70.3
Aqoxy2G01242 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.3e-06 57.0 35 68.6
Aqoxy2G01340 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.3e-06 57.0 53 58.5
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.3e-06 57.0 35 68.6
arahy.Tifrunner.gnm1.ann1.NHZ1NU Arachis hypogaea HOM05D000034 ORTHO05D000037 2.3e-06 57.0 63 49.2
Hma1.2p1_0018F.1_g013500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-06 57.0 64 50.0
Hma1.2p1_0269F.1_g107750 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-06 57.0 64 50.0
Hma1.2p1_0308F.1_g120260 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-06 57.0 64 50.0
Hma1.2p1_0672F.1_g201050 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-06 57.0 64 50.0
Hma1.2p1_3244F.1_g334330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.3e-06 57.0 64 50.0
Lj5g0026279 Lotus japonicus HOM05D000034 ORTHO05D000037 2.3e-06 57.0 75 46.7
PSO017G3336 Papaver somniferum HOM05D000034 ORTHO05D000037 2.3e-06 57.0 56 51.8
SHI27191 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-06 57.0 54 46.3
TWI75G1861 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.3e-06 57.0 59 49.2
TWI81G0533 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.3e-06 57.0 59 49.2
Atru.chr3.1441 Acer truncatum HOM05D000034 ORTHO05D000037 3.0e-06 56.6 35 74.3
arahy.Tifrunner.gnm1.ann1.48C0A1 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.0e-06 56.6 30 83.3
arahy.Tifrunner.gnm1.ann1.HC597B Arachis hypogaea HOM05D000034 ORTHO05D000037 3.0e-06 56.6 35 74.3
arahy.Tifrunner.gnm1.ann1.V5K3GS Arachis hypogaea HOM05D000034 ORTHO05D000037 3.0e-06 56.6 29 86.2
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 3.0e-06 56.6 46 60.9
PSO782G2923 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-06 56.6 37 67.6
PGR119G0632 Punica granatum HOM05D000034 ORTHO05D000037 3.0e-06 56.6 73 39.7
Rhsim11G0185300 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.0e-06 56.6 43 60.5
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.0e-06 56.6 43 60.5
TWI75G1793 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.0e-06 56.6 59 49.2
arahy.Tifrunner.gnm1.ann1.55DRF4 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.9e-06 56.2 63 49.2
Hma1.2p1_0000F.1_g000130 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.9e-06 56.2 63 49.2
Hma1.2p1_0006F.1_g004960 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.9e-06 56.2 63 49.2
Hma1.2p1_0071F.1_g037930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.9e-06 56.2 63 49.2
Hma1.2p1_1250F.1_g270290 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.9e-06 56.2 63 49.2
Lj3g0023510 Lotus japonicus HOM05D000034 ORTHO05D000037 3.9e-06 56.2 30 83.3
MBI19_g18847_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.9e-06 56.2 37 64.9
Aqoxy1G02789 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 5.0e-06 55.8 35 65.7
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 5.0e-06 55.8 50 52.0
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 5.0e-06 55.8 82 40.2
FvH4_2g13361 Fragaria vesca HOM05D000034 ORTHO05D000037 5.0e-06 55.8 46 60.9
FvH4_3g29911 Fragaria vesca HOM05D000034 ORTHO05D000037 5.0e-06 55.8 46 60.9
Lj1g0000815 Lotus japonicus HOM05D000034 ORTHO05D000037 5.0e-06 55.8 48 58.3
Lj1g0025151 Lotus japonicus HOM05D000034 ORTHO05D000037 5.0e-06 55.8 48 58.3
MBI06_g21009_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.0e-06 55.8 45 57.8
MBI08_g00970_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.0e-06 55.8 56 48.2
MBI17_g08356_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.0e-06 55.8 52 53.8
Oeu052615.1 Olea europaea HOM05D000034 ORTHO05D000037 5.0e-06 55.8 43 60.5
PSO541G4587 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-06 55.8 66 43.9
SHI13850 Sapria himalayana HOM05D000034 ORTHO05D000037 5.0e-06 55.8 54 46.3
TWI31G0756 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.0e-06 55.8 67 44.8
TWI73G1290 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.0e-06 55.8 67 46.3
TWI79G1493 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.0e-06 55.8 35 68.6
Aqoxy1G03317 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.6e-06 55.5 45 55.6
Aqoxy2G02168 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.6e-06 55.5 45 55.6
arahy.Tifrunner.gnm1.ann1.HK1YN3 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.6e-06 55.5 47 61.7
MBI14_g17384_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.6e-06 55.5 45 57.8
Oeu052246.1 Olea europaea HOM05D000034 ORTHO05D000037 6.6e-06 55.5 45 55.6
QL10p013157 Quercus lobata HOM05D000034 ORTHO05D000037 6.6e-06 55.5 60 45.0
QL10p037558 Quercus lobata HOM05D000034 ORTHO05D000037 6.6e-06 55.5 45 55.6
TWI39G0489 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.6e-06 55.5 67 44.8
Aqoxy5G02831 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.6e-06 55.1 37 67.6
arahy.Tifrunner.gnm1.ann1.MFJS9C Arachis hypogaea HOM05D000034 ORTHO05D000037 8.6e-06 55.1 69 43.5
arahy.Tifrunner.gnm1.ann1.MJ9A6B Arachis hypogaea HOM05D000034 ORTHO05D000037 8.6e-06 55.1 53 56.6
MSTRG.3282 Avicennia marina HOM05D000034 ORTHO05D001902 8.6e-06 55.1 36 66.7
CSS0044788 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-06 55.1 35 68.6
CANSAT25G0317 Cannabis sativa HOM05D000034 ORTHO05D000037 8.6e-06 55.1 46 60.9
Cpa.g.sc34.138 Carica papaya HOM05D000034 ORTHO05D000037 8.6e-06 55.1 35 71.4
Lj3g0002528 Lotus japonicus HOM05D000034 ORTHO05D000037 8.6e-06 55.1 48 58.3
MBI18_g26297_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.6e-06 55.1 48 56.2
Oeu059220.1 Olea europaea HOM05D000034 ORTHO05D000037 8.6e-06 55.1 43 58.1
QL10p052324 Quercus lobata HOM05D000034 ORTHO05D000037 8.6e-06 55.1 60 45.0
TWI34G1639 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.6e-06 55.1 70 47.1
TWI36G1086 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.6e-06 55.1 70 47.1
TWI74G1505 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.6e-06 55.1 70 47.1


User provided reference genes

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