Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.2e-184 647.9 332 100.0
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.6e-169 597.0 332 93.1
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.1e-167 592.4 327 92.4
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 6.8e-166 587.4 329 90.0
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.5e-165 586.3 332 90.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 4.4e-165 584.7 328 90.2
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 9.8e-165 583.6 332 89.5
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.2e-164 582.4 332 88.9
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 4.9e-164 581.3 332 88.6
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 6.4e-164 580.9 332 88.9
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.4e-164 580.9 332 88.6
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 8.3e-164 580.5 332 88.6
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.1e-163 580.1 332 88.9
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 3.2e-163 578.6 359 84.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 5.4e-163 577.8 333 88.6
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 7.0e-163 577.4 325 90.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.2e-162 576.6 332 87.7
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 3.5e-162 575.1 332 88.3
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 7.8e-162 573.9 333 88.3
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.0e-161 573.5 332 87.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.3e-161 572.4 330 88.5
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.5e-160 569.7 333 87.4
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.5e-160 569.7 333 87.4
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.5e-160 568.9 328 87.5
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.5e-160 568.9 328 88.1
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.3e-160 568.5 330 87.9
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 5.6e-160 567.8 325 88.9
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.2e-159 566.6 327 86.9
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.2e-159 566.6 335 86.0
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.6e-159 566.2 329 86.9
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.7e-159 564.7 323 88.5
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 4.7e-159 564.7 327 87.2
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.8e-158 562.8 329 86.9
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.3e-158 562.4 328 85.7
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 5.2e-158 561.2 327 86.2
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 5.2e-158 561.2 329 86.6
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 8.9e-158 560.5 329 86.0
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 8.9e-158 560.5 332 84.9
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-157 560.1 332 84.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.5e-157 559.7 327 86.2
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.6e-157 558.9 332 84.6
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.4e-157 558.5 332 86.1
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.4e-157 558.1 327 85.9
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.4e-157 558.1 327 85.9
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 5.8e-157 557.8 326 85.9
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.8e-157 557.8 329 86.3
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.9e-157 557.0 327 85.6
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 9.9e-157 557.0 332 85.8
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 9.9e-157 557.0 330 85.8
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.9e-157 557.0 327 85.6
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-156 556.6 332 84.3
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.9e-156 555.4 329 86.0
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.1e-155 553.5 329 85.4
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.1e-155 553.5 328 84.8
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 3.2e-155 552.0 327 85.3
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 9.2e-155 550.4 332 84.0
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 2.7e-154 548.9 371 78.4
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 2.7e-154 548.9 328 85.1
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.7e-154 548.9 332 83.7
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 3.5e-154 548.5 332 83.4
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 7.8e-154 547.4 332 83.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 7.8e-154 547.4 328 83.8
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 1.7e-153 546.2 332 83.4
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 5.1e-153 544.7 332 82.5
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 6.6e-153 544.3 327 84.1
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 2.5e-152 542.3 328 83.5
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 5.6e-152 541.2 332 82.5
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 5.6e-152 541.2 332 82.5
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 7.3e-152 540.8 332 81.6
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.6e-151 539.7 338 81.7
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 3.6e-151 538.5 331 81.6
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.4e-150 536.6 386 74.6
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.8e-150 536.2 300 90.0
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 5.2e-150 534.6 331 81.9
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 6.8e-150 534.3 329 80.5
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 6.8e-150 534.3 327 84.1
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.5e-149 533.1 331 80.1
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.5e-149 533.1 331 81.6
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.5e-149 533.1 329 80.5
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.0e-149 532.7 323 83.3
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 4.4e-149 531.6 329 80.2
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 80.2
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 80.2
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 80.2
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 80.2
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 7.6e-149 530.8 329 79.9
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 9.9e-149 530.4 329 79.9
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-148 530.0 331 80.4
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.9e-148 528.9 331 80.1
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.9e-148 528.9 332 82.2
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 6.4e-148 527.7 329 79.3
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.6e-146 523.1 455 63.7
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.0e-145 520.4 314 82.2
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.3e-145 520.0 302 90.4
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.9e-144 516.2 329 78.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.5e-144 515.8 305 84.6
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.6e-143 513.1 338 79.0
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.1e-142 510.4 325 78.8
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 9.0e-142 507.3 333 80.5
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 7.6e-141 504.2 330 77.9
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 4.9e-140 501.5 328 77.1
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.4e-139 499.2 328 78.4
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.3e-137 492.7 326 81.0
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.5e-136 489.2 332 75.3
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 2.1e-135 486.1 330 73.6
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 4.8e-135 485.0 333 74.8
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 9.0e-134 480.7 329 77.8
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.5e-133 478.4 377 68.2
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 4.2e-131 471.9 332 74.7
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 9.3e-131 470.7 335 76.1
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 3.3e-128 462.2 326 71.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 4.9e-124 448.4 277 80.5
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.4e-124 447.6 233 98.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 8.7e-121 437.6 323 73.1
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 8.2e-111 404.4 323 61.9
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.5e-109 400.2 330 62.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.6e-109 399.4 319 62.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 6.5e-108 394.8 234 83.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 4.4e-96 355.5 274 67.2
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 4.8e-95 352.1 321 59.2
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 6.9e-94 348.2 227 78.9
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.2e-92 343.2 338 61.8
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.9e-91 340.1 197 87.3
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.3e-87 327.4 235 68.9
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.3e-84 317.4 335 55.2
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 8.0e-82 308.1 220 74.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 3.0e-81 306.2 167 91.6
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 4.4e-80 302.4 220 72.7
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-75 287.3 220 70.9
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 5.5e-75 285.4 165 87.3
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 5.2e-73 278.9 333 44.7
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.0e-68 264.6 165 80.6
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.3e-68 263.5 279 57.7
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 6.3e-63 245.4 329 47.1
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.0e-61 240.4 135 88.1
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.9e-55 219.9 130 85.4
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.9e-43 180.6 103 85.4
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.1e-38 164.9 150 57.3
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 4.1e-38 162.9 204 50.5
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 5.4e-38 162.5 162 54.3
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 3.0e-36 156.8 92 88.0
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 5.1e-36 156.0 87 85.1
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 8.6e-36 155.2 103 74.8
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 4.9e-31 139.4 88 77.3
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 1.9e-30 137.5 69 91.3
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 4.2e-30 136.3 91 80.2
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.2e-30 136.3 77 89.6
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 4.6e-29 132.9 80 81.2
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 8.7e-28 128.6 74 83.8
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 2.5e-27 127.1 72 83.3
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.6e-27 125.2 75 82.7
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 2.6e-24 117.1 77 76.6
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.1e-22 111.7 69 79.7
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 2.7e-21 107.1 67 83.6
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 6.2e-18 95.9 65 78.5
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 6.2e-10 69.3 85 49.4
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 3.4e-08 63.5 77 45.5
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9


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