Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 5.0e-54 214.2 106 100.0
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.2e-52 209.5 106 98.1
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 8.0e-36 153.7 107 72.0
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 1.8e-35 152.5 107 73.8
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 3.0e-35 151.8 105 67.6
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 4.4e-34 147.9 116 66.4
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 9.8e-34 146.7 106 71.7
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 2.9e-33 145.2 106 67.9
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 6.4e-33 144.1 102 71.6
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 5.4e-32 141.0 111 64.9
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 7.0e-32 140.6 99 71.7
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 9.2e-32 140.2 115 64.3
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 1.2e-31 139.8 107 68.2
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 1.6e-31 139.4 108 66.7
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 2.0e-31 139.0 103 69.9
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 3.5e-31 138.3 117 63.2
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.5e-31 138.3 103 68.9
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 5.9e-31 137.5 101 67.3
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 5.9e-31 137.5 104 70.2
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.3e-30 136.3 115 65.2
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.7e-30 136.0 108 66.7
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 2.3e-30 135.6 108 65.7
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.0e-30 135.2 107 67.3
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 3.9e-30 134.8 103 67.0
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 6.6e-30 134.0 103 67.0
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 3.3e-29 131.7 99 65.7
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 7.3e-29 130.6 115 62.6
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 7.3e-29 130.6 105 62.9
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.2e-28 129.8 106 63.2
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 1.6e-28 129.4 121 57.0
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 8.0e-28 127.1 88 72.7
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 1.0e-27 126.7 103 64.1
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 3.1e-27 125.2 86 69.8
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 3.1e-27 125.2 102 64.7
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 3.1e-27 125.2 109 61.5
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 4.0e-27 124.8 85 69.4
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 6.8e-27 124.0 118 58.5
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 6.8e-27 124.0 96 67.7
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 2.0e-26 122.5 106 59.4
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 3.4e-26 121.7 94 64.9
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 5.8e-26 120.9 105 62.9
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 5.8e-26 120.9 92 65.2
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 7.5e-26 120.6 105 62.9
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 7.5e-26 120.6 107 58.9
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 9.8e-26 120.2 106 59.4
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 1.3e-25 119.8 98 60.2
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.3e-25 119.8 107 60.7
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 1.3e-25 119.8 106 56.6
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 1.7e-25 119.4 114 57.0
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 2.2e-25 119.0 102 64.7
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 4.9e-25 117.9 102 63.7
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 8.3e-25 117.1 96 60.4
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 1.1e-24 116.7 88 67.0
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.4e-24 116.3 78 73.1
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 1.4e-24 116.3 111 58.6
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 1.9e-24 115.9 87 63.2
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.9e-24 115.9 83 68.7
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.9e-24 115.9 83 68.7
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 1.9e-24 115.9 83 68.7
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 2.4e-24 115.5 88 67.0
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 2.4e-24 115.5 107 59.8
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 3.2e-24 115.2 108 56.5
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 3.2e-24 115.2 102 57.8
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 5.4e-24 114.4 74 71.6
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 5.4e-24 114.4 74 71.6
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 7.0e-24 114.0 104 59.6
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 9.2e-24 113.6 83 68.7
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 9.2e-24 113.6 105 55.2
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 1.2e-23 113.2 97 59.8
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 2.0e-23 112.5 108 58.3
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 3.5e-23 111.7 103 57.3
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 4.6e-23 111.3 101 57.4
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 4.6e-23 111.3 111 56.8
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.0e-22 110.2 77 68.8
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 1.0e-22 110.2 111 58.6
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 1.3e-22 109.8 101 55.4
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 1.7e-22 109.4 73 72.6
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 2.3e-22 109.0 106 57.5
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 2.3e-22 109.0 95 61.1
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 5.0e-22 107.8 107 56.1
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 6.6e-22 107.5 105 57.1
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 1.1e-21 106.7 107 57.0
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.5e-21 106.3 106 52.8
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.9e-21 105.9 108 53.7
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 2.5e-21 105.5 110 54.5
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.5e-21 105.5 111 56.8
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 3.3e-21 105.1 109 56.0
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 5.6e-21 104.4 81 63.0
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 7.3e-21 104.0 103 52.4
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 7.3e-21 104.0 107 56.1
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 7.3e-21 104.0 87 62.1
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 7.3e-21 104.0 73 64.4
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 7.3e-21 104.0 98 53.1
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 9.5e-21 103.6 103 52.4
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 9.5e-21 103.6 103 52.4
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 9.5e-21 103.6 109 56.0
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 9.5e-21 103.6 95 54.7
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-20 103.2 72 66.7
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 1.2e-20 103.2 109 55.0
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 1.6e-20 102.8 110 53.6
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 1.6e-20 102.8 99 57.6
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 2.1e-20 102.4 101 56.4
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 2.1e-20 102.4 69 66.7
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 2.1e-20 102.4 103 54.4
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 2.8e-20 102.1 99 54.5
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 2.8e-20 102.1 118 51.7
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 3.6e-20 101.7 102 53.9
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 3.6e-20 101.7 118 50.8
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 3.6e-20 101.7 89 59.6
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 4.7e-20 101.3 99 56.6
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 6.2e-20 100.9 80 61.2
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 8.1e-20 100.5 102 54.9
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 8.1e-20 100.5 102 54.9
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 8.1e-20 100.5 102 54.9
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 8.1e-20 100.5 67 71.6
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 1.4e-19 99.8 102 54.9
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 1.2e-18 96.7 105 48.6
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 7.5e-18 94.0 82 53.7
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 9.8e-18 93.6 83 57.8
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 2.9e-17 92.0 59 72.9
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 1.9e-16 89.4 79 57.0
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 1.7e-14 82.8 54 66.7
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 7.3e-13 77.4 70 48.6
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 3.1e-11 72.0 67 49.3
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 8.9e-11 70.5 51 74.5
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 9.9e-10 67.0 78 41.0
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 1.3e-09 66.6 70 42.9
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 1.1e-08 63.5 61 60.7


User provided reference genes

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