Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005403 Camellia sinensis var. sinensis HOM05D004921 ORTHO05D006008 2.3e-210 735.3 386 100.0
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 8.9e-101 371.3 326 67.2
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 3.2e-90 336.3 326 64.1
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 8.7e-88 328.2 322 62.7
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 1.3e-64 251.1 335 49.3
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 8.4e-59 231.9 341 46.6
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 3.0e-56 223.4 329 48.6
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 1.1e-47 194.9 391 37.6
Hma1.2p1_0070F.1_g037670 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 1.7e-43 181.0 329 41.0
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 2.2e-43 180.6 361 39.1
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 2.5e-42 177.2 329 39.5
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.8e-37 161.0 339 39.2
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 1.8e-37 161.0 362 38.1
Nitab4.5_0000518g0040 Nicotiana tabacum HOM05D004921 ORTHO05D006008 1.3e-35 154.8 333 36.6
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 2.9e-35 153.7 331 39.9
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 5.0e-35 152.9 333 38.1
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 1.1e-34 151.8 336 38.1
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 4.2e-34 149.8 335 36.1
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 7.2e-34 149.1 332 36.7
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 9.4e-34 148.7 317 37.9
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 8.0e-33 145.6 341 36.1
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 2.3e-32 144.1 349 35.2
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 4.4e-31 139.8 323 32.8
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 5.7e-31 139.4 332 34.9
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 7.4e-31 139.0 327 35.5
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 1.3e-30 138.3 339 36.0
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 1.3e-30 138.3 336 35.4
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 1.3e-30 138.3 331 32.3
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 1.7e-30 137.9 326 35.6
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 1.7e-30 137.9 341 35.2
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 2.8e-30 137.1 339 34.8
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 6.3e-30 136.0 394 28.9
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 1.1e-29 135.2 345 32.8
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 1.8e-29 134.4 332 36.4
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 7.0e-29 132.5 328 37.2
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 9.1e-29 132.1 351 34.8
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 1.2e-28 131.7 356 32.0
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 1.6e-28 131.3 334 35.0
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 1.0e-27 128.6 345 33.9
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 1.0e-27 128.6 334 32.6
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 2.9e-27 127.1 365 32.6
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 1.5e-26 124.8 318 34.9
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 1.5e-26 124.8 344 31.7
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 2.5e-26 124.0 330 35.8
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 3.2e-26 123.6 340 33.2
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 3.2e-26 123.6 247 40.5
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 4.2e-26 123.2 325 32.6
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 1.2e-25 121.7 341 33.7
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 1.4e-24 118.2 359 31.5
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 1.4e-24 118.2 326 33.4
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 1.4e-24 118.2 366 33.3
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 1.4e-24 118.2 362 32.6
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 2.0e-23 114.4 328 34.5
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 2.6e-23 114.0 350 33.1
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 2.6e-23 114.0 320 34.1
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 2.6e-23 114.0 331 31.4
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 2.2e-22 110.9 320 33.4
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 2.8e-22 110.5 331 32.0
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 1.4e-21 108.2 191 37.7
Dinv21951 Davidia involucrata HOM05D004921 ORTHO05D006008 1.6e-20 104.8 114 55.3
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 2.0e-20 104.4 341 33.7
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 2.7e-20 104.0 352 31.8
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 4.5e-20 103.2 335 32.2
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 5.9e-20 102.8 353 30.9
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 2.9e-19 100.5 351 32.8
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.1e-18 98.6 346 28.6
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 3.2e-18 97.1 373 30.3
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 4.2e-18 96.7 338 31.1
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 4.2e-18 96.7 373 29.8
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 7.2e-18 95.9 353 28.6
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.3e-16 90.9 242 35.1
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.3e-16 90.9 242 35.1
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 3.0e-16 90.5 340 30.9
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 8.8e-16 89.0 52 86.5
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 1.5e-15 88.2 353 29.2
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 1.5e-15 88.2 340 30.6
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 2.0e-15 87.8 102 49.0
Dinv21952 Davidia involucrata HOM05D004921 ORTHO05D006008 2.6e-15 87.4 121 47.1
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 5.7e-15 86.3 249 33.7
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 7.5e-15 85.9 249 33.7
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.7e-14 84.7 335 26.3
Zm00001eb069160 Zea mays HOM05D004921 ORTHO05D006008 2.8e-14 84.0 345 29.0
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.8e-13 81.3 249 33.3
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 1.8e-13 81.3 341 30.2
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 1.8e-13 81.3 341 27.3
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 2.4e-13 80.9 343 29.2
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 4.1e-13 80.1 350 29.4
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 7.0e-13 79.3 263 31.9
Os04g0636600 Oryza sativa ssp. japonica HOM05D004921 ORTHO05D006008 9.1e-13 79.0 335 29.9
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 1.6e-12 78.2 397 28.0
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 1.6e-12 78.2 306 31.0
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 2.7e-12 77.4 317 29.3
COL.COLO4_35617 Corchorus olitorius HOM05D004921 ORTHO05D006008 2.7e-12 77.4 48 81.2
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 2.7e-12 77.4 300 28.7
Dinv04895 Davidia involucrata HOM05D004921 ORTHO05D006008 4.5e-12 76.6 42 90.5
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 4.5e-12 76.6 42 90.5
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 7.7e-12 75.9 318 27.7
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 1.7e-11 74.7 347 27.7
Dinv40591 Davidia involucrata HOM05D004921 ORTHO05D006008 2.3e-11 74.3 42 88.1
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 2.3e-11 74.3 89 49.4
Cpa.g.sc82.54 Carica papaya HOM05D004921 ORTHO05D006008 2.9e-11 73.9 57 64.9
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 3.8e-11 73.6 202 31.2
Dinv32118 Davidia involucrata HOM05D004921 ORTHO05D006008 3.8e-11 73.6 42 85.7
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 6.6e-11 72.8 313 27.5
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 1.5e-10 71.6 317 27.4
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 3.3e-10 70.5 315 29.5
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 4.2e-10 70.1 232 31.9
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 4.2e-10 70.1 134 39.6
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 1.2e-09 68.6 347 28.5
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 1.0e-08 65.5 328 30.2
MBI14_g34262_MAGBIO Magnolia biondii HOM05D000221 ORTHO05D006008 2.0e-07 61.2 56 57.1
Actinidia16045 Actinidia chinensis HOM05D004921 ORTHO05D006008 2.6e-07 60.8 66 51.5
MBI14_g14180_MAGBIO Magnolia biondii HOM05D000221 ORTHO05D006008 3.4e-07 60.5 45 64.4
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 3.7e-06 57.0 126 32.5


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