Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005323 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 2.5e-150 535.4 268 100.0
CSS0018127 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 7.2e-150 533.9 268 97.8
CSS0002910 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 8.2e-146 520.4 268 96.3
CSS0002327 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 6.8e-116 421.0 281 81.1
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.1e-28 128.3 110 58.2
CSS0020651 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-27 127.9 152 53.3
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-27 125.2 110 58.2
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 1.2e-24 117.9 104 55.8
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.0e-24 115.2 105 56.2
CSS0016147 Camellia sinensis var. sinensis HOM05D002020 ORTHO05D002046 2.0e-22 110.5 107 57.0
CSS0019869 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 9.8e-22 108.2 80 66.2
CSS0027538 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 6.3e-21 105.5 84 61.9
CSS0045565 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D000004 5.4e-20 102.4 105 50.5
CSS0037613 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 6.6e-18 95.5 127 46.5
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 1.0e-15 88.2 105 46.7
CSS0046313 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.8e-15 85.5 85 51.8
CSS0005407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-14 84.7 98 48.0
CSS0021346 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-14 84.3 85 50.6
CSS0022804 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-14 83.6 105 45.7
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-14 83.2 92 46.7
CSS0030874 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-12 78.2 110 42.7
QL01p048042 Quercus lobata HOM05D001672 ORTHO05D000004 5.4e-12 75.9 108 36.1
CSS0011592 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.0e-12 75.5 86 48.8
CSS0015726 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.9e-11 72.4 105 44.8
CSS0011611 Camellia sinensis var. sinensis HOM05D002853 ORTHO05D003030 1.3e-10 71.2 54 59.3
CSS0033927 Camellia sinensis var. sinensis HOM05D001352 ORTHO05D001354 1.7e-10 70.9 77 49.4
QL11p007130 Quercus lobata HOM05D003083 ORTHO05D003466 3.9e-10 69.7 95 37.9
CSS0041535 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.6e-10 68.6 80 47.5
Oeu040057.1 Olea europaea HOM05D000003 ORTHO05D000004 1.1e-09 68.2 105 34.3
CSS0036239 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-09 67.0 50 56.0
Oeu051347.1 Olea europaea HOM05D014708 ORTHO05D018827 2.5e-09 67.0 85 38.8
QL02p037654 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-09 67.0 89 40.4
QL10p042354 Quercus lobata HOM05D002009 ORTHO05D005728 9.5e-09 65.1 109 34.9
QL11p036849 Quercus lobata HOM05D000003 ORTHO05D000004 9.5e-09 65.1 148 29.1
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 1.6e-08 64.3 101 34.7
Haze_18381 Corylus avellana HOM05D002854 ORTHO05D003051 2.8e-08 63.5 135 34.1
Oeu024442.1 Olea europaea HOM05D000003 ORTHO05D000004 2.8e-08 63.5 105 33.3
Aqoxy4G01140 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.6e-08 63.2 111 36.9
CSS0045250 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D008076 3.6e-08 63.2 60 53.3
QL06p026672 Quercus lobata HOM05D000324 ORTHO05D004875 8.0e-08 62.0 121 35.5
Cpa.g.sc2.104 Carica papaya HOM05D000003 ORTHO05D000004 1.0e-07 61.6 91 38.5
Cpa.g.sc83.78 Carica papaya HOM05D000003 ORTHO05D000004 1.0e-07 61.6 108 33.3
PGSC0003DMG403018810 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.4e-07 61.2 107 37.4
Cpa.g.sc43.118 Carica papaya HOM05D004758 ORTHO05D006063 2.3e-07 60.5 105 34.3
QL07p047387 Quercus lobata HOM05D002028 ORTHO05D002474 2.3e-07 60.5 106 33.0
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 2.3e-07 60.5 105 35.2
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 3.1e-07 60.1 104 32.7
Oeu005734.1 Olea europaea HOM05D000003 ORTHO05D000004 4.0e-07 59.7 105 31.4
Aqoxy4G01308 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.2e-07 59.3 86 36.0
CSS0034524 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 5.2e-07 59.3 86 38.4
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.8e-07 58.9 108 35.2
Aqoxy4G01530 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-06 58.2 111 31.5
MBI17_g45042_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.0e-06 57.4 138 31.9
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-06 57.4 105 28.6
Hund22285 Selenicereus undatus HOM05D000003 ORTHO05D000004 2.0e-06 57.4 109 33.9
Hund23992 Selenicereus undatus HOM05D000003 ORTHO05D000004 2.0e-06 57.4 109 33.9
PGSC0003DMG400014038 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.0e-06 57.4 108 33.3
Aqoxy2G02832 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-06 57.0 111 34.2
Aqoxy3G01395 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-06 57.0 126 36.5
Oeu011316.1 Olea europaea HOM05D000003 ORTHO05D000004 2.6e-06 57.0 81 34.6
Oeu032320.1 Olea europaea HOM05D000003 ORTHO05D000004 2.6e-06 57.0 98 33.7
Cpa.g.sc139.50 Carica papaya HOM05D000003 ORTHO05D000004 3.4e-06 56.6 106 32.1
Sopen03g024660 Solanum pennellii HOM05D000268 ORTHO05D000261 3.4e-06 56.6 107 35.5
Oeu045954.1 Olea europaea HOM05D000003 ORTHO05D000004 4.4e-06 56.2 105 31.4
MBI18_g10205_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.8e-06 55.8 90 35.6
PGSC0003DMG400024990 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.8e-06 55.8 108 36.1
QL10p000304 Quercus lobata HOM05D006645 ORTHO05D008129 7.5e-06 55.5 77 33.8
PGSC0003DMG400011299 Solanum tuberosum HOM05D000003 ORTHO05D000004 9.8e-06 55.1 100 36.0


User provided reference genes

Program Settings