Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005281 Camellia sinensis var. sinensis HOM05D005695 ORTHO05D007810 1.5e-92 342.8 171 100.0
CSS0020065 Camellia sinensis var. sinensis HOM05D005695 ORTHO05D007810 2.1e-38 162.9 170 57.1
CSS0010643 Camellia sinensis var. sinensis HOM05D005695 ORTHO05D007810 4.8e-38 161.8 176 56.2
vmacro21118 Vaccinium macrocarpon HOM05D005695 ORTHO05D007810 5.6e-31 138.3 180 48.3
GSVIVG01019305001 Vitis vinifera HOM05D005695 ORTHO05D007810 2.8e-30 136.0 170 50.0
Hma1.2p1_0128F.1_g060080 Hydrangea macrophylla HOM05D005695 ORTHO05D007810 3.6e-30 135.6 170 48.2
DCAR_015741 Daucus carota HOM05D005695 ORTHO05D007810 4.5e-28 128.6 170 48.2
HanXRQChr04g0117691 Helianthus annuus HOM05D005695 ORTHO05D007810 4.5e-28 128.6 170 45.9
Duzib177G0357 Durio zibethinus HOM05D005695 ORTHO05D007810 1.7e-27 126.7 170 45.9
Cc05_g03930 Coffea canephora HOM05D005695 ORTHO05D007810 3.8e-27 125.6 170 45.3
MSTRG.4989 Avicennia marina HOM05D005695 ORTHO05D007810 8.4e-27 124.4 170 44.7
ECA236G4408 Erigeron canadensis HOM05D005695 ORTHO05D007810 8.4e-27 124.4 170 45.3
MD02G1232000 Malus domestica HOM05D005695 ORTHO05D007810 8.4e-27 124.4 170 47.1
Rhsim03G0068300 Rhododendron simsii HOM05D005695 ORTHO05D007810 1.9e-26 123.2 182 43.4
Gohir.A11G224224 Gossypium hirsutum HOM05D005695 ORTHO05D007810 2.4e-26 122.9 170 44.7
Gorai.007G250100 Gossypium raimondii HOM05D005695 ORTHO05D007810 2.4e-26 122.9 170 45.3
CSS0017367 Camellia sinensis var. sinensis HOM05D005695 ORTHO05D007810 3.2e-26 122.5 86 74.4
RcHm_v2.0_Chr1g0340701 Rosa chinensis HOM05D005695 ORTHO05D007810 3.2e-26 122.5 180 46.1
Nn7g37385 Nelumbo nucifera HOM05D005695 ORTHO05D007810 4.2e-26 122.1 170 45.3
Ciclev10032172m.g Citrus clementina HOM05D005695 ORTHO05D007810 7.1e-26 121.3 170 45.3
Cfa003697 Carpinus fangiana HOM05D005695 ORTHO05D007810 9.3e-26 120.9 170 45.3
CiPaw.02G047100 Carya illinoinensis HOM05D005695 ORTHO05D007810 9.3e-26 120.9 170 44.7
FAN06G4316 Fragaria x ananassa HOM05D005695 ORTHO05D007810 2.1e-25 119.8 170 46.5
Lj3g0016519 Lotus japonicus HOM05D005695 ORTHO05D007810 2.1e-25 119.8 176 44.9
Manes.09G133400 Manihot esculenta HOM05D005695 ORTHO05D007810 2.1e-25 119.8 176 44.9
Peaxi162Scf00907g00028 Petunia axillaris HOM05D005695 ORTHO05D007810 2.1e-25 119.8 167 44.9
Potri.013G070800 Populus trichocarpa HOM05D005695 ORTHO05D007810 2.1e-25 119.8 176 42.0
Prupe.2G106600 Prunus persica HOM05D005695 ORTHO05D007810 2.1e-25 119.8 170 45.3
Haze_15789 Corylus avellana HOM05D005695 ORTHO05D007810 2.7e-25 119.4 170 44.7
THA.LOC104820817 Tarenaya hassleriana HOM05D005695 ORTHO05D007810 2.7e-25 119.4 170 41.8
Sed0004515 Sechium edule HOM05D005695 ORTHO05D007810 4.6e-25 118.6 170 42.9
ClCG05G002480 Citrullus lanatus HOM05D005695 ORTHO05D007810 7.9e-25 117.9 170 44.1
Solyc01g081460.3 Solanum lycopersicum HOM05D005695 ORTHO05D007810 1.0e-24 117.5 172 43.0
FAN01G0968 Fragaria x ananassa HOM05D005695 ORTHO05D007810 1.8e-24 116.7 170 44.7
arahy.Tifrunner.gnm1.ann1.HX5TFH Arachis hypogaea HOM05D005695 ORTHO05D007810 2.3e-24 116.3 170 43.5
FvH4_7g08330 Fragaria vesca HOM05D005695 ORTHO05D007810 2.3e-24 116.3 170 45.3
TWI60G1156 Tripterygium wilfordii HOM05D005695 ORTHO05D007810 3.0e-24 115.9 170 44.1
arahy.Tifrunner.gnm1.ann1.9M82AQ Arachis hypogaea HOM05D005695 ORTHO05D007810 5.1e-24 115.2 170 42.9
PGSC0003DMG400031121 Solanum tuberosum HOM05D005695 ORTHO05D007810 5.1e-24 115.2 172 43.6
SGA_v2.0_scaffold4G02228 Striga asiatica HOM05D005695 ORTHO05D007810 5.1e-24 115.2 182 40.7
CAN.G992.23 Capsicum annuum HOM05D005695 ORTHO05D007810 8.7e-24 114.4 172 42.4
Migut.N01667 Erythranthe guttata HOM05D005695 ORTHO05D007810 8.7e-24 114.4 170 40.0
Nitab4.5_0000792g0190 Nicotiana tabacum HOM05D005695 ORTHO05D007810 8.7e-24 114.4 180 41.1
Nitab4.5_0006785g0030 Nicotiana tabacum HOM05D005695 ORTHO05D007810 8.7e-24 114.4 172 42.4
Hund17169 Selenicereus undatus HOM05D005695 ORTHO05D007810 1.1e-23 114.0 170 41.8
Lalb_Chr07g0194921 Lupinus albus HOM05D005695 ORTHO05D007810 1.9e-23 113.2 170 44.1
CANSAT54G1451 Cannabis sativa HOM05D005695 ORTHO05D007810 2.5e-23 112.8 173 43.4
FAN10G2937 Fragaria x ananassa HOM05D005695 ORTHO05D007810 2.5e-23 112.8 170 43.5
Phvul.010G040100 Phaseolus vulgaris HOM05D005695 ORTHO05D007810 2.5e-23 112.8 170 42.9
Psat4g216440 Pisum sativum HOM05D005695 ORTHO05D007810 2.5e-23 112.8 170 42.9
Sabra13G0061700 Salix brachista HOM05D005695 ORTHO05D007810 2.5e-23 112.8 176 41.5
Sopen01g033020 Solanum pennellii HOM05D005695 ORTHO05D007810 2.5e-23 112.8 172 43.0
SalBow4G2268 Salvia bowleyana HOM05D005695 ORTHO05D007810 3.3e-23 112.5 167 44.9
AUR62038021 Chenopodium quinoa HOM05D005695 ORTHO05D007810 4.3e-23 112.1 170 41.8
Hma1.2p1_0353F.1_g133140 Hydrangea macrophylla HOM05D005695 ORTHO05D007810 4.3e-23 112.1 173 43.4
Medtr8g009680 Medicago truncatula HOM05D005695 ORTHO05D007810 5.6e-23 111.7 170 41.8
TAR715G0002 Trochodendron aralioides HOM05D005695 ORTHO05D007810 5.6e-23 111.7 174 45.4
TPR.G17373 Trifolium pratense HOM05D005695 ORTHO05D007810 7.4e-23 111.3 170 42.9
Lsat_1_v5_gn_7_33441 Lactuca sativa HOM05D005695 ORTHO05D007810 9.6e-23 110.9 170 42.4
Glyma.03G100600 Glycine max HOM05D005695 ORTHO05D007810 1.3e-22 110.5 170 41.8
CsaV3_3G009910 Cucumis sativus L. HOM05D005695 ORTHO05D007810 2.1e-22 109.8 170 42.4
Aa31LG11G11970 Aethionema arabicum HOM05D005695 ORTHO05D007810 3.7e-22 109.0 171 38.6
Zm00001eb210200 Zea mays HOM05D005695 ORTHO05D007810 3.7e-22 109.0 170 40.0
Sc23g0004120 Simmondsia chinensis HOM05D005695 ORTHO05D007810 4.8e-22 108.6 180 43.9
Aqoxy3G02210 Aquilegia oxysepala HOM05D005695 ORTHO05D007810 6.2e-22 108.2 168 40.5
Glyma.07G122300 Glycine max HOM05D005695 ORTHO05D007810 6.2e-22 108.2 170 41.2
Zm00001eb004570 Zea mays HOM05D005695 ORTHO05D007810 6.2e-22 108.2 170 39.4
COL.COLO4_21416 Corchorus olitorius HOM05D005695 ORTHO05D007810 8.1e-22 107.8 189 39.7
Cpa.g.sc73.26 Carica papaya HOM05D005695 ORTHO05D007810 1.8e-21 106.7 170 41.8
CDE11G0447 Ceratophyllum demersum HOM05D005695 ORTHO05D007810 2.4e-21 106.3 170 41.2
AT5G17660 Arabidopsis thaliana HOM05D005695 ORTHO05D007810 5.3e-21 105.1 170 38.8
Medtr8g009700 Medicago truncatula HOM05D005695 ORTHO05D007810 9.0e-21 104.4 170 40.0
CARHR195520 Cardamine hirsuta HOM05D005695 ORTHO05D007810 1.2e-20 104.0 170 38.2
Thhalv10014195m.g Eutrema salsugineum HOM05D005695 ORTHO05D007810 1.2e-20 104.0 170 39.4
AL6G28750 Arabidopsis lyrata HOM05D005695 ORTHO05D007810 2.0e-20 103.2 170 38.2
Carub.0006s1590 Capsella rubella HOM05D005695 ORTHO05D007810 2.6e-20 102.8 170 38.2
Os01g0535900 Oryza sativa ssp. japonica HOM05D005695 ORTHO05D007810 4.5e-20 102.1 181 40.9
PSO782G5257 Papaver somniferum HOM05D005695 ORTHO05D007810 4.5e-20 102.1 174 40.2
Ca_25883_v3 Cicer arietinum L. HOM05D005695 ORTHO05D007810 5.8e-20 101.7 176 42.0
PGR083G0136 Punica granatum HOM05D005695 ORTHO05D007810 5.8e-20 101.7 170 38.8
Sp6g26560 Schrenkiella parvula HOM05D005695 ORTHO05D007810 7.6e-20 101.3 170 39.4
C09p59500 Brassica napus HOM05D005695 ORTHO05D007810 2.9e-19 99.4 170 39.4
A10p21740 Brassica napus HOM05D005695 ORTHO05D007810 3.8e-19 99.0 170 39.4
BraA10t44235Z Brassica rapa HOM05D005695 ORTHO05D007810 3.8e-19 99.0 170 39.4
PSO063G4708 Papaver somniferum HOM05D005695 ORTHO05D007810 3.8e-19 99.0 171 40.4
BcaC04g18770 Brassica carinata HOM05D005695 ORTHO05D007810 8.4e-19 97.8 170 38.8
unitig_22.g5902 Utricularia gibba HOM05D005695 ORTHO05D007810 1.1e-18 97.4 170 40.6
BolC9t58788H Brassica oleracea HOM05D005695 ORTHO05D007810 1.4e-18 97.1 170 38.8
BcaB08g36754 Brassica carinata HOM05D005695 ORTHO05D007810 9.3e-18 94.4 170 38.2
Oeu060728.1 Olea europaea HOM05D005695 ORTHO05D007810 9.3e-18 94.4 65 67.7
Actinidia21589 Actinidia chinensis HOM05D005695 ORTHO05D007810 1.6e-17 93.6 161 41.0
RcHm_v2.0_Chr1g0340401 Rosa chinensis HOM05D005695 ORTHO05D007810 1.6e-17 93.6 65 67.7
RcHm_v2.0_Chr1g0340511 Rosa chinensis HOM05D005695 ORTHO05D007810 1.6e-17 93.6 72 63.9
MELO3C006212.2 Cucumis melo HOM05D005695 ORTHO05D007810 2.7e-17 92.8 86 60.5
SEGI_31772 Sequoiadendron giganteum HOM05D005695 ORTHO05D007810 3.5e-17 92.4 177 41.2
VMungo0331G0999 Vigna mungo HOM05D005695 ORTHO05D007810 1.0e-16 90.9 86 59.3
HPP92_023786 Vanilla planifolia HOM05D005695 ORTHO05D007810 2.3e-16 89.7 166 38.0
ATR0568G060 Amborella trichopoda HOM05D005695 ORTHO05D007810 2.4e-13 79.7 153 35.9
Pp3c19_7240 Physcomitrium patens HOM05D005695 ORTHO05D007810 2.6e-12 76.3 181 34.8
Pp3c18_9830 Physcomitrium patens HOM05D005695 ORTHO05D007810 6.5e-11 71.6 177 33.3
Atru.chr2.1636 Acer truncatum HOM05D005695 ORTHO05D007810 2.5e-10 69.7 109 41.3
AagrBONN_evm.TU.Sc2ySwM_117.3790 Anthoceros agrestis HOM05D005695 ORTHO05D007810 3.5e-09 65.9 164 32.9
FAN03G1677 Fragaria x ananassa HOM05D005695 ORTHO05D007810 3.3e-07 59.3 126 36.5
SMO351G0486 Selaginella moellendorffii HOM05D005695 ORTHO05D007810 7.4e-07 58.2 173 27.2
Eucgr.D01073 Eucalyptus grandis HOM05D005695 ORTHO05D007810 9.7e-07 57.8 134 35.8
Mapoly0006s0284 Marchantia polymorpha HOM05D005695 ORTHO05D007810 4.8e-06 55.5 167 27.5


User provided reference genes

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