Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005219 Camellia sinensis var. sinensis HOM05D000116 ORTHO05D113517 2.3e-50 201.8 94 100.0
Aqoxy5G00079 Aquilegia oxysepala HOM05D000116 ORTHO05D000703 1.2e-06 56.6 69 46.4
Thecc.01G245800 Theobroma cacao HOM05D000116 ORTHO05D000703 2.6e-06 55.5 26 92.3
Atru.chr5.1917 Acer truncatum HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
arahy.Tifrunner.gnm1.ann1.9CZI5M Arachis hypogaea HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
arahy.Tifrunner.gnm1.ann1.Z7H12U Arachis hypogaea HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
CAN.G771.47 Capsicum annuum HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
MELO3C022405.2 Cucumis melo HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
CsaV3_6G007220 Cucumis sativus L. HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Eucgr.H00830 Eucalyptus grandis HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Hma1.2p1_1393F.1_g280300 Hydrangea macrophylla HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Lj1A77T23 Lonicera japonica HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
MD05G1184700 Malus domestica HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
MD10G1172500 Malus domestica HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Manes.13G042100 Manihot esculenta HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Nitab4.5_0001557g0050 Nicotiana tabacum HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Nitab4.5_0004777g0020 Nicotiana tabacum HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
PSO170G6675 Papaver somniferum HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Peaxi162Scf00517g00116 Petunia axillaris HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Prupe.8G210900 Prunus persica HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Solyc06g083690.3 Solanum lycopersicum HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
Sopen06g035110 Solanum pennellii HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
PGSC0003DMG400020080 Solanum tuberosum HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
TWI18G0206 Tripterygium wilfordii HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
TAR362G0338 Trochodendron aralioides HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
vmacro14779 Vaccinium macrocarpon HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
GSVIVG01028475001 Vitis vinifera HOM05D000116 ORTHO05D000703 3.4e-06 55.1 25 96.0
AL7G23770 Arabidopsis lyrata HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
AT4G28730 Arabidopsis thaliana HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
BcaC06g32607 Brassica carinata HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
A03p58380 Brassica napus HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
C07p56400 Brassica napus HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
BolC7t46120H Brassica oleracea HOM05D003036 ORTHO05D009331 4.5e-06 54.7 25 92.0
BraA03t14900Z Brassica rapa HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
CARHR236520 Cardamine hirsuta HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
Cfa002508 Carpinus fangiana HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 96.0
Duzib211G0298 Durio zibethinus HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 96.0
Sp7g26740 Schrenkiella parvula HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
TWI75G0283 Tripterygium wilfordii HOM05D000116 ORTHO05D000703 4.5e-06 54.7 25 92.0
Thhalv10026359m.g Eutrema salsugineum HOM05D000116 ORTHO05D000703 5.9e-06 54.3 25 88.0
Glyma.06G269000 Glycine max HOM05D000116 ORTHO05D000703 5.9e-06 54.3 25 92.0
Glyma.10G041900 Glycine max HOM05D000116 ORTHO05D000703 5.9e-06 54.3 25 92.0
Sed0013499 Sechium edule HOM05D000116 ORTHO05D000703 5.9e-06 54.3 26 84.6
VMungo0720G1403 Vigna mungo HOM05D000116 ORTHO05D000703 5.9e-06 54.3 25 92.0
Actinidia37566 Actinidia chinensis HOM05D000116 ORTHO05D000703 7.7e-06 53.9 25 92.0
Ciclev10022530m.g Citrus clementina HOM05D000116 ORTHO05D000703 7.7e-06 53.9 25 92.0
Cc01_g17520 Coffea canephora HOM05D000116 ORTHO05D000703 7.7e-06 53.9 25 92.0
Dinv43042 Davidia involucrata HOM05D000116 ORTHO05D000703 7.7e-06 53.9 25 92.0
Lj5g0007779 Lotus japonicus HOM05D000116 ORTHO05D000703 7.7e-06 53.9 25 92.0
PSO764G0350 Papaver somniferum HOM05D000116 ORTHO05D000703 7.7e-06 53.9 25 92.0
PGR083G1033 Punica granatum HOM05D000116 ORTHO05D000703 7.7e-06 53.9 25 92.0
THA.LOC104814543 Tarenaya hassleriana HOM05D000116 ORTHO05D000703 7.7e-06 53.9 25 92.0


User provided reference genes

Program Settings