Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.3e-117 426.4 218 100.0
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.0e-106 390.2 218 90.4
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.0e-106 390.2 218 90.4
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.0e-106 390.2 218 90.4
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.5e-81 306.6 187 86.6
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.5e-81 306.6 216 71.3
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.9e-74 281.2 216 69.0
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.5e-33 147.1 157 45.2
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.5e-33 145.6 144 47.2
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.7e-33 144.8 151 47.0
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.3e-32 144.1 167 41.3
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.5e-32 141.7 158 42.4
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.1e-31 141.0 154 47.4
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-29 133.7 164 41.5
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.7e-28 127.9 213 35.7
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.3e-27 127.5 160 38.1
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-27 126.3 217 35.9
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.4e-26 124.0 224 33.9
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.9e-24 116.3 157 40.8
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 2.5e-23 113.2 156 41.0
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 9.4e-23 111.3 181 34.3
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-22 110.9 189 32.8
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-19 100.9 153 37.9
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-19 100.5 150 37.3
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.2e-19 100.1 211 33.2
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.2e-17 94.4 158 34.2
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.0e-16 91.3 215 29.8
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.8e-16 89.4 159 33.3
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 5.0e-16 89.0 129 33.3
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 3.2e-15 86.3 224 29.0
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.2e-15 85.1 222 26.1
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 7.2e-15 85.1 155 28.4
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-13 79.3 164 34.8
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.2e-13 79.0 156 31.4
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 6.7e-13 78.6 150 33.3
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.2e-12 77.8 192 29.7
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 2.0e-12 77.0 133 33.8
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.0e-12 77.0 150 30.7
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.5e-12 75.1 150 33.3
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.7e-12 74.7 150 30.0
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-11 74.3 155 29.0
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-11 74.3 155 29.0
Rhsim11G0006000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.3e-11 74.3 156 30.1
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-11 73.9 65 47.7
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.2e-11 73.6 155 28.4
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.2e-11 73.6 150 30.0
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-11 73.2 150 30.0
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-11 73.2 150 30.0
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.7e-11 72.8 150 29.3
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.8e-11 72.4 81 45.7
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.8e-11 72.4 150 30.0
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.2e-11 71.6 150 29.3
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.2e-11 71.6 149 29.5
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 1.1e-10 71.2 187 29.9
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-10 70.9 150 29.3
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-10 70.5 163 29.4
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.1e-10 69.7 81 43.2
Rhsim05G0127300 Rhododendron simsii HOM05D024557 ORTHO05D010234 4.1e-10 69.3 80 42.5
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.1e-10 69.3 127 37.0
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.1e-10 69.3 147 29.9
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-10 68.9 143 29.4
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.3e-10 68.9 143 29.4
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.0e-10 68.6 73 43.8
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.2e-09 67.8 85 45.9
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.6e-09 67.4 177 23.2
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 4.5e-09 65.9 124 32.3
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.5e-09 65.9 148 27.7
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 1.0e-08 64.7 156 28.8
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 1.7e-08 63.9 148 28.4
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-08 62.8 188 26.6
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.5e-07 60.8 90 36.7
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.5e-07 60.1 148 26.4
Rhsim01G0102200 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.5e-07 58.9 125 30.4
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.2e-07 58.5 221 29.0
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 1.2e-06 57.8 156 27.6
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-06 56.2 83 37.3


User provided reference genes

Program Settings