Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005186 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D043286 1.0e-44 183.0 89 100.0
CSS0008224 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D043286 5.9e-40 167.2 89 91.0
CSS0016554 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-13 77.8 81 51.9
CSS0010759 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-12 75.9 82 50.0
CSS0025625 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D000004 2.6e-11 72.0 88 46.6
CSS0044276 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-11 72.0 82 47.6
CSS0008242 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.4e-11 71.2 80 47.5
CSS0030187 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.5e-11 70.5 77 48.1
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.3e-10 67.4 80 48.8
CSS0020053 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-09 65.1 80 47.5
CSS0006009 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.1e-09 64.7 72 50.0
CSS0004052 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.2e-09 63.5 80 48.8
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-08 62.4 80 45.0
Aqoxy1G02903 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.0e-07 60.1 79 38.0
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-07 60.1 80 45.0
MBI01_g09963_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.0e-07 57.8 80 38.8
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-07 57.8 79 32.9
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-07 57.8 79 32.9
QL11p030734 Quercus lobata HOM05D000969 ORTHO05D000899 6.6e-07 57.4 79 32.9
CSS0033585 Camellia sinensis var. sinensis HOM05D023622 ORTHO05D000004 1.9e-06 55.8 68 44.1
Atru.chr1.2846 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 55.5 81 33.3
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 2.5e-06 55.5 79 31.6
Aqoxy1G01793 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.3e-06 55.1 79 34.2
QL10p002852 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 55.1 79 31.6
TAR549G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.3e-06 55.1 79 38.0
TWI77G0755 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.3e-06 54.7 69 39.1
TAR640G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 4.3e-06 54.7 79 36.7
PGSC0003DMG400032795 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.6e-06 54.3 80 31.2
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-06 53.9 81 35.8
QL01p048324 Quercus lobata HOM05D002615 ORTHO05D002913 7.3e-06 53.9 79 31.6
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 7.3e-06 53.9 79 34.2


User provided reference genes

Program Settings