Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005162 Camellia sinensis var. sinensis HOM05D007863 ORTHO05D009265 2.2e-37 158.7 92 100.0
Sopen03g035400 Solanum pennellii HOM05D007863 ORTHO05D009265 2.0e-14 82.4 94 56.4
Rhsim08G0215300 Rhododendron simsii HOM05D007863 ORTHO05D009265 9.8e-14 80.1 88 59.1
Solyc03g116510.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 3.7e-13 78.2 94 54.3
Nitab4.5_0001764g0040 Nicotiana tabacum HOM05D007863 ORTHO05D009265 6.3e-13 77.4 50 80.0
CAN.G407.102 Capsicum annuum HOM05D007863 ORTHO05D009265 1.8e-12 75.9 89 51.7
Ciclev10027122m.g Citrus clementina HOM05D007863 ORTHO05D009265 3.1e-12 75.1 97 53.6
Nitab4.5_0010254g0050 Nicotiana tabacum HOM05D007863 ORTHO05D009265 3.1e-12 75.1 50 78.0
Thecc.06G070300 Theobroma cacao HOM05D007863 ORTHO05D009265 3.1e-12 75.1 90 48.9
Hma1.2p1_0515F.1_g170180 Hydrangea macrophylla HOM05D007863 ORTHO05D009265 4.1e-12 74.7 95 52.6
Cpa.g.sc10.233 Carica papaya HOM05D007863 ORTHO05D009265 9.2e-12 73.6 47 78.7
Rhsim12G0192500 Rhododendron simsii HOM05D007863 ORTHO05D009265 1.2e-11 73.2 44 84.1
Gohir.A10G075500 Gossypium hirsutum HOM05D007863 ORTHO05D009265 1.6e-11 72.8 47 76.6
Gohir.D10G076000 Gossypium hirsutum HOM05D007863 ORTHO05D009265 1.6e-11 72.8 47 76.6
Gorai.011G081800 Gossypium raimondii HOM05D007863 ORTHO05D009265 1.6e-11 72.8 47 76.6
TWI12G0528 Tripterygium wilfordii HOM05D007863 ORTHO05D009265 1.6e-11 72.8 47 78.7
QL05p028236 Quercus lobata HOM05D007863 ORTHO05D009265 2.0e-11 72.4 94 53.2
Cfa001994 Carpinus fangiana HOM05D007863 ORTHO05D009265 2.7e-11 72.0 48 77.1
COL.COLO4_12919 Corchorus olitorius HOM05D007863 ORTHO05D009265 2.7e-11 72.0 92 52.2
RcHm_v2.0_Chr2g0136401 Rosa chinensis HOM05D007863 ORTHO05D009265 4.5e-11 71.2 48 75.0
CiPaw.01G245400 Carya illinoinensis HOM05D007863 ORTHO05D009265 7.8e-11 70.5 94 50.0
PGR102G1764 Punica granatum HOM05D007863 ORTHO05D009265 7.8e-11 70.5 48 72.9
Potri.003G062300 Populus trichocarpa HOM05D007863 ORTHO05D009265 1.0e-10 70.1 47 74.5
CANSAT56G0457 Cannabis sativa HOM05D007863 ORTHO05D009265 1.7e-10 69.3 43 79.1
FvH4_6g30170 Fragaria vesca HOM05D007863 ORTHO05D009265 2.3e-10 68.9 48 72.9
FAN14G0247 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.3e-10 68.9 48 72.9
MD17G1207500 Malus domestica HOM05D007863 ORTHO05D009265 2.3e-10 68.9 44 79.5
Manes.04G115800 Manihot esculenta HOM05D007863 ORTHO05D009265 2.3e-10 68.9 43 79.1
FAN02G1499 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.9e-10 68.6 48 70.8
FAN05G0465 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.9e-10 68.6 48 70.8
FAN09G3905 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.9e-10 68.6 48 70.8
Lj3g0006922 Lotus japonicus HOM05D007863 ORTHO05D009265 3.8e-10 68.2 90 45.6
Prupe.3G082000 Prunus persica HOM05D007863 ORTHO05D009265 5.0e-10 67.8 47 74.5
THA.LOC104808229 Tarenaya hassleriana HOM05D007863 ORTHO05D009265 6.6e-10 67.4 44 70.5
arahy.Tifrunner.gnm1.ann1.JQ3RYK Arachis hypogaea HOM05D007863 ORTHO05D009265 2.5e-09 65.5 84 47.6
EL10Ac9g21922 Beta vulgaris HOM05D007863 ORTHO05D009265 2.5e-09 65.5 45 75.6
AUR62011544 Chenopodium quinoa HOM05D007863 ORTHO05D009265 2.5e-09 65.5 86 48.8
Potri.001G171701 Populus trichocarpa HOM05D007863 ORTHO05D009265 3.3e-09 65.1 47 68.1
Ca_01070_v3 Cicer arietinum L. HOM05D007863 ORTHO05D009265 4.3e-09 64.7 44 70.5
Manes.11G054000 Manihot esculenta HOM05D007863 ORTHO05D009265 5.6e-09 64.3 90 48.9
Haze_16524 Corylus avellana HOM05D007863 ORTHO05D009265 7.3e-09 63.9 96 49.0
DCAR_025492 Daucus carota HOM05D007863 ORTHO05D009265 9.5e-09 63.5 48 68.8
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 1.2e-08 63.2 44 72.7
Migut.I00793 Erythranthe guttata HOM05D007863 ORTHO05D009265 2.1e-08 62.4 46 69.6
Sabra03G0036200 Salix brachista HOM05D007863 ORTHO05D009265 2.1e-08 62.4 47 66.0
TPR.G37228 Trifolium pratense HOM05D007863 ORTHO05D009265 2.8e-08 62.0 45 66.7
Lj3g0003830 Lotus japonicus HOM05D007863 ORTHO05D009265 4.7e-08 61.2 44 65.9
Lalb_Chr14g0373721 Lupinus albus HOM05D007863 ORTHO05D009265 4.7e-08 61.2 48 66.7
Psat5g301160 Pisum sativum HOM05D007863 ORTHO05D009265 4.7e-08 61.2 44 65.9
Medtr2g103440 Medicago truncatula HOM05D007863 ORTHO05D009265 1.0e-07 60.1 45 64.4
TPR.G38680 Trifolium pratense HOM05D007863 ORTHO05D009265 1.0e-07 60.1 45 68.9
Atru.chr1.3052 Acer truncatum HOM05D007863 ORTHO05D009265 1.4e-07 59.7 35 85.7
Sopen03g035410 Solanum pennellii HOM05D007863 ORTHO05D009265 2.3e-07 58.9 40 75.0
Glyma.13G364100 Glycine max HOM05D007863 ORTHO05D009265 4.0e-07 58.2 75 44.0
Medtr4g011030 Medicago truncatula HOM05D007863 ORTHO05D009265 4.0e-07 58.2 45 66.7
Glyma.07G031800 Glycine max HOM05D007863 ORTHO05D009265 5.2e-07 57.8 81 42.0
Lalb_Chr04g0262451 Lupinus albus HOM05D007863 ORTHO05D009265 6.8e-07 57.4 44 65.9
MBI01_g37813_MAGBIO Magnolia biondii HOM05D007863 ORTHO05D009265 6.8e-07 57.4 44 68.2
DCAR_016255 Daucus carota HOM05D007863 ORTHO05D009265 8.9e-07 57.0 37 75.7
Lalb_Chr25g0279481 Lupinus albus HOM05D007863 ORTHO05D009265 1.2e-06 56.6 44 65.9
Psat7g256040 Pisum sativum HOM05D007863 ORTHO05D009265 1.2e-06 56.6 45 64.4
Glyma.15G009600 Glycine max HOM05D007863 ORTHO05D009265 2.6e-06 55.5 81 39.5
ATR1156G029 Amborella trichopoda HOM05D007863 ORTHO05D009265 3.4e-06 55.1 37 70.3
CsaV3_7G032550 Cucumis sativus L. HOM05D007863 ORTHO05D009265 4.4e-06 54.7 48 62.5
Aqoxy7G03727 Aquilegia oxysepala HOM05D007863 ORTHO05D009265 5.7e-06 54.3 36 69.4
CARHR015920 Cardamine hirsuta HOM05D010306 ORTHO05D009265 5.7e-06 54.3 45 62.2
Glyma.08G211000 Glycine max HOM05D007863 ORTHO05D009265 5.7e-06 54.3 43 62.8
ClCG09G002780 Citrullus lanatus HOM05D007863 ORTHO05D009265 7.5e-06 53.9 37 73.0
Nitab4.5_0009643g0020 Nicotiana tabacum HOM05D007863 ORTHO05D009265 7.5e-06 53.9 86 43.0
Solyc03g116520.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 7.5e-06 53.9 73 46.6


User provided reference genes

Program Settings