Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 1.3e-115 419.9 234 100.0
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 3.0e-75 285.8 235 66.4
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 7.4e-74 281.2 234 67.9
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 8.1e-73 277.7 201 74.6
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 1.1e-69 267.3 233 63.5
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 6.7e-67 258.1 201 69.7
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 7.4e-66 254.6 204 68.1
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 4.0e-64 248.8 200 68.0
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 2.7e-60 236.1 240 57.9
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 8.7e-59 231.1 238 55.9
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 6.3e-57 224.9 217 60.4
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 8.2e-57 224.6 201 61.7
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 2.6e-55 219.5 198 61.6
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 1.0e-54 217.6 195 61.5
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 8.5e-54 214.5 202 56.4
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 3.2e-53 212.6 203 60.1
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 1.3e-51 207.2 191 59.2
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 2.3e-51 206.5 191 58.6
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 6.7e-51 204.9 200 57.5
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 1.1e-50 204.1 197 57.4
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 2.5e-50 203.0 192 57.8
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 2.5e-50 203.0 194 57.7
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 5.7e-50 201.8 170 64.7
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 7.4e-50 201.4 194 57.2
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 1.3e-49 200.7 204 57.8
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 1.3e-49 200.7 196 57.7
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 1.6e-49 200.3 202 55.4
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 1.6e-49 200.3 199 56.3
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 1.6e-49 200.3 203 56.7
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 6.3e-49 198.4 197 57.4
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 6.3e-49 198.4 204 56.4
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 1.8e-48 196.8 201 54.2
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 2.4e-48 196.4 200 54.5
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 4.1e-48 195.7 193 54.4
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 6.9e-48 194.9 208 54.8
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 9.1e-48 194.5 207 53.1
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 1.5e-47 193.7 199 53.8
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 5.9e-47 191.8 191 56.0
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 5.9e-47 191.8 192 55.2
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 1.0e-46 191.0 193 53.4
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 2.9e-46 189.5 204 52.0
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 1.9e-45 186.8 169 61.5
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 1.2e-44 184.1 193 54.4
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 1.6e-44 183.7 202 51.5
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 2.1e-44 183.3 198 54.0
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 4.6e-44 182.2 193 51.8
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 6.1e-44 181.8 200 54.5
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 7.9e-44 181.4 193 52.8
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 7.9e-44 181.4 193 52.3
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 7.9e-44 181.4 194 54.1
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 1.0e-43 181.0 214 48.1
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 2.0e-42 176.8 192 54.2
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 2.6e-42 176.4 188 53.7
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 2.6e-42 176.4 194 52.1
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 3.3e-42 176.0 228 48.2
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 3.3e-42 176.0 228 48.2
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 3.3e-42 176.0 191 51.8
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 3.3e-42 176.0 194 50.5
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 4.4e-42 175.6 201 50.2
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 5.7e-42 175.3 229 47.6
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 7.4e-42 174.9 192 51.0
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 1.3e-41 174.1 229 47.6
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 2.2e-41 173.3 187 52.9
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 4.8e-41 172.2 191 49.2
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 4.8e-41 172.2 230 47.8
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 6.3e-41 171.8 197 49.7
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 6.3e-41 171.8 190 53.2
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 8.2e-41 171.4 197 51.3
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 1.1e-40 171.0 197 51.3
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 1.4e-40 170.6 200 51.5
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 2.4e-40 169.9 198 49.0
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 3.1e-40 169.5 201 49.3
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 9.1e-40 167.9 188 49.5
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 1.5e-39 167.2 197 49.2
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 2.0e-39 166.8 205 51.2
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 2.0e-39 166.8 205 50.2
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.6e-39 166.4 206 49.5
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 2.6e-39 166.4 169 54.4
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 3.4e-39 166.0 203 50.2
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 4.5e-39 165.6 197 47.7
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 7.7e-39 164.9 191 50.3
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 7.7e-39 164.9 201 46.3
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.3e-38 164.1 206 49.5
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 1.7e-38 163.7 191 50.3
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 1.7e-38 163.7 197 47.2
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.9e-38 162.9 205 51.2
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 6.5e-38 161.8 192 49.5
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 8.5e-38 161.4 200 48.5
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 8.5e-38 161.4 205 48.8
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 1.1e-37 161.0 195 50.3
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 1.4e-37 160.6 186 50.5
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 9.4e-37 157.9 196 48.0
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 9.4e-37 157.9 196 48.0
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 9.4e-37 157.9 195 48.7
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 1.2e-36 157.5 194 49.0
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 1.6e-36 157.1 199 48.2
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 1.6e-36 157.1 204 46.6
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 2.1e-36 156.8 192 49.0
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 3.6e-36 156.0 241 41.9
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 3.6e-36 156.0 203 46.3
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 6.1e-36 155.2 216 44.9
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 6.7e-35 151.8 234 43.6
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 6.7e-35 151.8 196 46.9
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 6.7e-35 151.8 196 51.0
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 4.4e-34 149.1 197 48.2
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 2.2e-33 146.7 197 45.2
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 1.8e-32 143.7 203 45.3
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 1.3e-30 137.5 172 47.7
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 6.5e-30 135.2 288 35.8
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 1.2e-26 124.4 195 44.1
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 1.4e-24 117.5 111 55.0
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 2.9e-22 109.8 150 41.3
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.2e-18 97.8 97 51.5
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 4.4e-18 95.9 94 55.3
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 2.2e-17 93.6 164 40.9
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 2.2e-17 93.6 105 51.4
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 2.7e-15 86.7 78 56.4
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 7.7e-15 85.1 203 33.5
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 5.5e-13 79.0 217 32.3
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 7.2e-13 78.6 106 45.3
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 7.2e-13 78.6 176 36.4
SGA_v2.0_scaffold54G19641 Striga asiatica HOM05D005561 ORTHO05D006834 2.1e-12 77.0 71 59.2
SEGI_13318 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 5.4e-08 62.4 58 53.4


User provided reference genes

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