Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.8e-192 675.6 322 100.0
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 7.2e-189 663.7 322 98.4
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.4e-179 632.9 322 93.2
CSS0041687 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.0e-110 404.1 322 64.6
Rhsim04G0202700 Rhododendron simsii HOM05D025536 ORTHO05D010877 3.4e-45 186.4 305 37.0
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 5.6e-24 115.9 245 35.1
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 7.4e-24 115.5 249 34.9
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.0e-22 109.8 238 34.9
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 6.9e-22 109.0 262 32.1
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.5e-21 107.8 227 35.7
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 1.9e-19 100.9 197 33.5
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 2.4e-19 100.5 256 28.9
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 2.1e-18 97.4 310 27.1
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 2.5e-16 90.5 223 27.8
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 2.5e-16 90.5 307 25.7
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 1.3e-15 88.2 258 28.7
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 2.8e-15 87.0 284 27.5
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 6.2e-15 85.9 237 29.1
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.0e-14 83.2 134 36.6
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 9.0e-14 82.0 199 32.7
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.0e-13 80.9 202 29.2
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.5e-13 79.7 134 35.8
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.0e-12 78.6 205 28.8
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 2.2e-12 77.4 155 29.7
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-12 77.0 237 25.3
Gohir.D06G025700 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.2e-11 73.6 243 28.0
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 4.2e-11 73.2 233 26.2
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.5e-11 72.8 198 27.3
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.5e-11 72.8 250 26.4
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 7.1e-11 72.4 239 28.0
Gohir.D06G026000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 7.1e-11 72.4 243 28.4
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 7.1e-11 72.4 139 34.5
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 9.3e-11 72.0 275 26.9
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 2.1e-10 70.9 241 30.3
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 2.7e-10 70.5 285 26.7
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.7e-10 70.5 270 30.0
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.9e-10 68.9 203 26.1
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 7.9e-10 68.9 243 24.7
Gohir.A06G029200 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.0e-09 68.6 239 28.5
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.0e-09 68.6 202 28.2
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.8e-09 67.8 246 28.0
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.8e-09 67.8 192 30.2
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.3e-09 67.4 192 30.2
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.3e-09 67.4 192 30.2
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.3e-09 67.4 192 30.2
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.0e-09 67.0 240 27.1
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 3.9e-09 66.6 169 30.8
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.1e-09 66.2 201 31.3
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.1e-09 66.2 285 29.1
RhsimUnG0034500 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.1e-09 66.2 192 30.2
COL.COLO4_09953 Corchorus olitorius HOM05D017380 ORTHO05D019049 6.7e-09 65.9 193 29.0
Gohir.D06G028300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 6.7e-09 65.9 210 30.5
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.5e-08 63.9 201 24.9
COL.COLO4_09593 Corchorus olitorius HOM05D014846 ORTHO05D016249 4.3e-08 63.2 211 28.0
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-07 61.6 269 26.0
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 1.6e-07 61.2 229 25.3
DCAR_024801 Daucus carota HOM05D062669 ORTHO05D045068 4.8e-07 59.7 243 25.9
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 6.3e-07 59.3 198 26.3
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 6.3e-07 59.3 208 29.3
TWI74G1430 Tripterygium wilfordii HOM05D000249 ORTHO05D000206 2.4e-06 57.4 161 28.0
COL.COLO4_09561 Corchorus olitorius HOM05D014846 ORTHO05D016249 4.1e-06 56.6 200 28.5


User provided reference genes

Program Settings