Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.6e-178 628.6 326 100.0
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.1e-171 606.7 328 97.6
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 1.8e-139 499.6 324 83.3
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 4.1e-131 471.9 334 73.4
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 2.3e-126 456.1 323 73.4
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 6.3e-124 448.0 324 72.5
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 3.1e-123 445.7 324 70.7
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 3.1e-123 445.7 329 70.2
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 5.0e-121 438.3 323 70.0
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 5.0e-121 438.3 322 70.8
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.5e-120 436.8 324 68.2
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 2.5e-120 436.0 325 69.2
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 4.2e-120 435.3 324 69.8
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 5.5e-120 434.9 321 70.4
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 9.5e-120 434.1 328 68.6
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 1.2e-119 433.7 321 70.4
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 2.8e-119 432.6 323 68.1
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 3.0e-118 429.1 331 68.6
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 3.0e-118 429.1 363 67.5
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 5.2e-118 428.3 323 67.2
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 8.8e-118 427.6 320 69.1
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.4e-117 425.6 320 69.7
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.4e-117 425.2 322 69.6
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 5.7e-117 424.9 311 70.4
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.7e-117 424.9 323 67.2
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 9.8e-117 424.1 322 67.4
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 1.3e-116 423.7 321 67.3
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 3.7e-116 422.2 328 67.1
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.7e-116 422.2 322 67.4
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 8.3e-116 421.0 329 64.7
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.1e-115 420.6 321 67.0
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.8e-115 419.9 321 67.3
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 2.4e-115 419.5 319 67.1
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 3.1e-115 419.1 322 67.4
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 4.1e-115 418.7 322 67.4
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 4.1e-115 418.7 323 69.7
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 5.4e-115 418.3 310 70.3
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.2e-114 417.2 322 67.4
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 3.5e-114 415.6 326 67.5
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 4.5e-114 415.2 322 66.8
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 5.9e-114 414.8 274 73.7
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 7.8e-114 414.5 321 66.7
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 3.8e-113 412.1 322 66.5
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 5.0e-113 411.8 294 72.8
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 5.0e-113 411.8 301 70.4
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 1.5e-112 410.2 316 66.8
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 1.5e-112 410.2 317 66.9
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 1.9e-112 409.8 316 66.8
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.9e-112 409.8 307 70.4
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 4.3e-112 408.7 298 69.1
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 4.3e-112 408.7 321 66.0
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 5.6e-112 408.3 321 66.0
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 7.3e-112 407.9 328 66.2
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 9.5e-112 407.5 278 73.0
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 1.2e-111 407.1 324 64.8
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 3.6e-111 405.6 308 69.2
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 6.1e-111 404.8 313 66.1
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 6.1e-111 404.8 321 64.8
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.0e-110 404.1 322 63.7
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 1.0e-110 404.1 323 64.4
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.4e-110 403.7 323 64.1
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 1.8e-110 403.3 323 65.6
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 3.0e-110 402.5 330 65.2
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 8.9e-110 401.0 295 69.5
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 8.9e-110 401.0 325 64.3
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 2.6e-109 399.4 331 66.2
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 7.5e-109 397.9 255 76.9
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 2.9e-108 396.0 255 76.5
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 2.9e-108 396.0 334 62.0
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 6.4e-108 394.8 319 64.6
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 4.1e-107 392.1 279 69.5
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 1.3e-105 387.1 341 60.4
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 4.7e-103 378.6 324 63.9
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.1e-102 377.5 324 62.0
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 3.1e-102 375.9 237 78.9
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 2.0e-101 373.2 342 60.5
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 7.5e-101 371.3 324 62.0
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 9.8e-101 370.9 305 65.9
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.7e-100 370.2 296 64.2
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 2.4e-99 366.3 296 64.5
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 3.2e-99 365.9 273 67.4
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.6e-98 363.6 289 65.1
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.0e-97 359.4 237 73.0
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 8.6e-97 357.8 294 67.0
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 5.6e-96 355.1 269 69.5
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.1e-95 353.2 237 74.3
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 6.2e-95 351.7 234 73.5
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 4.0e-94 349.0 275 64.0
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 2.6e-93 346.3 304 59.5
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 9.9e-93 344.4 319 58.3
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 3.7e-92 342.4 320 57.2
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 1.1e-91 340.9 269 63.6
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 3.9e-89 332.4 269 62.5
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.9e-88 330.1 213 77.9
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.6e-87 325.9 395 49.6
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 4.7e-87 325.5 278 62.9
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.8e-86 323.6 213 73.2
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 4.9e-84 315.5 269 63.6
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 1.9e-72 276.9 291 51.2
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 4.5e-69 265.8 326 45.1
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 1.1e-67 261.2 243 55.1
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.0e-65 253.1 219 62.1
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 8.7e-65 251.5 318 45.3
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 1.6e-63 247.3 253 52.6
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 7.1e-59 231.9 249 49.0
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.1e-57 225.7 130 90.8
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.4e-54 217.6 148 70.9
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 1.8e-49 200.7 278 42.8
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 3.6e-42 176.4 108 76.9
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 6.1e-34 149.1 88 85.2
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.8e-33 147.5 88 85.2
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.1e-30 135.2 81 84.0
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 5.9e-21 105.9 72 69.4
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.5e-19 100.5 66 80.3
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.2e-18 98.2 65 81.5
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 2.8e-15 87.0 271 28.4
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 1.2e-08 65.1 36 80.6
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 7.5e-08 62.4 96 44.8
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 9.8e-08 62.0 35 80.0


User provided reference genes

Program Settings