Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005076 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 1.1e-96 356.7 182 100.0
CSS0049698 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 3.7e-73 278.5 200 75.0
CSS0035980 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 1.6e-71 273.1 216 70.4
CSS0032767 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 5.9e-71 271.2 204 74.0
CSS0006384 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 5.5e-69 264.6 216 68.5
CSS0010569 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 1.0e-67 260.4 216 68.5
Rhsim04G0203900 Rhododendron simsii HOM05D007243 ORTHO05D008795 2.1e-60 236.1 208 62.5
Dinv44497 Davidia involucrata HOM05D007243 ORTHO05D008795 1.4e-59 233.4 208 63.5
Actinidia40159 Actinidia chinensis HOM05D007243 ORTHO05D008795 1.5e-58 229.9 204 62.7
GSVIVG01017910001 Vitis vinifera HOM05D007243 ORTHO05D008795 2.0e-58 229.6 216 60.2
Manes.03G182200 Manihot esculenta HOM05D007243 ORTHO05D008795 3.4e-58 228.8 216 59.7
QL06p003720 Quercus lobata HOM05D007243 ORTHO05D008795 5.7e-58 228.0 208 59.6
Sabra10G0051200 Salix brachista HOM05D007243 ORTHO05D008795 8.3e-57 224.2 208 60.6
Cfa015954 Carpinus fangiana HOM05D007243 ORTHO05D008795 1.4e-56 223.4 208 59.6
Ciclev10004897m.g Citrus clementina HOM05D007243 ORTHO05D008795 2.4e-56 222.6 208 59.6
CANSAT78G2216 Cannabis sativa HOM05D007243 ORTHO05D008795 3.2e-56 222.2 208 60.6
Solyc01g079800.4 Solanum lycopersicum HOM05D007243 ORTHO05D008795 3.2e-56 222.2 208 61.1
Sopen01g031560 Solanum pennellii HOM05D007243 ORTHO05D008795 4.1e-56 221.9 208 60.6
Potri.010G092200 Populus trichocarpa HOM05D007243 ORTHO05D008795 5.4e-56 221.5 208 60.6
TWI53G0761 Tripterygium wilfordii HOM05D007243 ORTHO05D008795 7.0e-56 221.1 216 57.4
Haze_00531 Corylus avellana HOM05D007243 ORTHO05D008795 9.2e-56 220.7 208 58.7
PGR004G2730 Punica granatum HOM05D007243 ORTHO05D008795 4.6e-55 218.4 210 58.1
Cpa.g.sc147.23 Carica papaya HOM05D007243 ORTHO05D008795 5.9e-55 218.0 216 57.9
PGSC0003DMG400008995 Solanum tuberosum HOM05D007243 ORTHO05D008795 5.9e-55 218.0 208 60.1
Atru.chr4.2530 Acer truncatum HOM05D007243 ORTHO05D008795 7.8e-55 217.6 208 59.1
CiPaw.01G162000 Carya illinoinensis HOM05D007243 ORTHO05D008795 1.0e-54 217.2 216 55.6
Migut.G00308 Erythranthe guttata HOM05D007243 ORTHO05D008795 3.9e-54 215.3 216 57.4
Peaxi162Scf01336g00019 Petunia axillaris HOM05D007243 ORTHO05D008795 3.9e-54 215.3 208 58.7
Cc03_g03320 Coffea canephora HOM05D007243 ORTHO05D008795 5.0e-54 214.9 208 57.7
FAN12G3450 Fragaria x ananassa HOM05D007243 ORTHO05D008795 8.6e-54 214.2 208 58.2
FAN22G0759 Fragaria x ananassa HOM05D007243 ORTHO05D008795 1.1e-53 213.8 204 59.3
SGA_v2.0_scaffold237G43809 Striga asiatica HOM05D007243 ORTHO05D008795 1.1e-53 213.8 217 57.1
CAN.G69.17 Capsicum annuum HOM05D007243 ORTHO05D008795 1.5e-53 213.4 208 59.1
FvH4_4g14870 Fragaria vesca HOM05D007243 ORTHO05D008795 1.9e-53 213.0 208 57.7
MSTRG.4007 Avicennia marina HOM05D007243 ORTHO05D008795 2.5e-53 212.6 212 58.0
RcHm_v2.0_Chr4g0417341 Rosa chinensis HOM05D007243 ORTHO05D008795 2.5e-53 212.6 208 58.7
COL.COLO4_05826 Corchorus olitorius HOM05D007243 ORTHO05D008795 3.3e-53 212.2 204 60.3
FAN07G2291 Fragaria x ananassa HOM05D007243 ORTHO05D008795 4.3e-53 211.8 204 59.3
FAN17G2203 Fragaria x ananassa HOM05D007243 ORTHO05D008795 7.3e-53 211.1 204 58.8
arahy.Tifrunner.gnm1.ann1.LD7MZL Arachis hypogaea HOM05D007243 ORTHO05D008795 2.1e-52 209.5 216 54.2
Prupe.1G153600 Prunus persica HOM05D007243 ORTHO05D008795 6.2e-52 208.0 204 59.8
arahy.Tifrunner.gnm1.ann1.V369CS Arachis hypogaea HOM05D007243 ORTHO05D008795 8.0e-52 207.6 216 53.7
TPR.G37009 Trifolium pratense HOM05D007243 ORTHO05D008795 1.4e-51 206.8 216 54.2
Gohir.A10G118100 Gossypium hirsutum HOM05D007243 ORTHO05D008795 2.3e-51 206.1 204 57.4
Glyma.07G258400 Glycine max HOM05D007243 ORTHO05D008795 3.1e-51 205.7 216 53.7
MD16G1186800 Malus domestica HOM05D007243 ORTHO05D008795 3.1e-51 205.7 208 58.2
Medtr4g131750 Medicago truncatula HOM05D007243 ORTHO05D008795 3.1e-51 205.7 216 53.2
HanXRQChr17g0534161 Helianthus annuus HOM05D007243 ORTHO05D008795 4.0e-51 205.3 208 55.3
Gorai.011G165900 Gossypium raimondii HOM05D007243 ORTHO05D008795 5.2e-51 204.9 208 56.2
ClCG05G005310 Citrullus lanatus HOM05D007243 ORTHO05D008795 6.8e-51 204.5 216 52.3
TAR636G1546 Trochodendron aralioides HOM05D007243 ORTHO05D008795 6.8e-51 204.5 208 56.7
CsaV3_3G013560 Cucumis sativus L. HOM05D007243 ORTHO05D008795 8.9e-51 204.1 216 52.8
Nn1g02202 Nelumbo nucifera HOM05D007243 ORTHO05D008795 8.9e-51 204.1 208 55.8
MELO3C006551.2 Cucumis melo HOM05D007243 ORTHO05D008795 1.2e-50 203.8 208 53.4
Gohir.D10G148600 Gossypium hirsutum HOM05D007243 ORTHO05D008795 3.4e-50 202.2 208 55.8
CSS0009496 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 4.4e-50 201.8 197 62.4
Ca_21100_v3 Cicer arietinum L. HOM05D007243 ORTHO05D008795 4.4e-50 201.8 216 51.4
ECA240G0209 Erigeron canadensis HOM05D007243 ORTHO05D008795 5.8e-50 201.4 208 53.8
Aqoxy5G00515 Aquilegia oxysepala HOM05D007243 ORTHO05D008795 7.5e-50 201.1 208 54.8
Phvul.003G076400 Phaseolus vulgaris HOM05D007243 ORTHO05D008795 7.5e-50 201.1 216 51.4
AUR62034676 Chenopodium quinoa HOM05D007243 ORTHO05D008795 1.7e-49 199.9 210 54.3
Os01g0970600 Oryza sativa ssp. japonica HOM05D007243 ORTHO05D008795 2.2e-49 199.5 210 51.4
Duzib151G0916 Durio zibethinus HOM05D007243 ORTHO05D008795 2.9e-49 199.1 208 55.8
THA.LOC104822302 Tarenaya hassleriana HOM05D007243 ORTHO05D008795 2.9e-49 199.1 208 53.8
Sc25g0004470 Simmondsia chinensis HOM05D007243 ORTHO05D008795 3.7e-49 198.7 216 53.7
BcaB05g23378 Brassica carinata HOM05D007243 ORTHO05D008795 4.9e-49 198.4 208 55.3
Lsat_1_v5_gn_7_64360 Lactuca sativa HOM05D007243 ORTHO05D008795 1.1e-48 197.2 208 53.8
DCAR_027172 Daucus carota HOM05D007243 ORTHO05D008795 1.4e-48 196.8 204 57.4
Thecc.04G225400 Theobroma cacao HOM05D007243 ORTHO05D008795 1.9e-48 196.4 200 56.5
Lj4g0016275 Lotus japonicus HOM05D007243 ORTHO05D008795 2.4e-48 196.1 216 50.5
Aa31LG11G10430 Aethionema arabicum HOM05D007243 ORTHO05D008795 7.0e-48 194.5 208 53.8
BcaC03g13651 Brassica carinata HOM05D007243 ORTHO05D008795 1.6e-47 193.4 208 53.8
BNapus_Darmor_BZH_scaffold_38p02710 Brassica napus HOM05D007243 ORTHO05D008795 1.6e-47 193.4 208 53.8
BolC2t06945H Brassica oleracea HOM05D007243 ORTHO05D008795 1.6e-47 193.4 208 53.8
A02p05320 Brassica napus HOM05D007243 ORTHO05D008795 2.0e-47 193.0 208 53.8
CARHR193750 Cardamine hirsuta HOM05D007243 ORTHO05D008795 2.0e-47 193.0 208 54.8
Thhalv10013438m.g Eutrema salsugineum HOM05D007243 ORTHO05D008795 2.7e-47 192.6 208 53.8
Lalb_Chr12g0196161 Lupinus albus HOM05D007243 ORTHO05D008795 2.7e-47 192.6 216 50.5
BraA02t05490Z Brassica rapa HOM05D007243 ORTHO05D008795 3.5e-47 192.2 208 53.4
Psat4g008120 Pisum sativum HOM05D007243 ORTHO05D008795 6.0e-47 191.4 216 50.5
AL6G30660 Arabidopsis lyrata HOM05D007243 ORTHO05D008795 2.3e-46 189.5 208 53.4
VMungo1215G2267 Vigna mungo HOM05D007243 ORTHO05D008795 3.0e-46 189.1 237 47.7
AT5G19210 Arabidopsis thaliana HOM05D007243 ORTHO05D008795 3.9e-46 188.7 208 52.9
Sp6g25180 Schrenkiella parvula HOM05D003236 ORTHO05D008795 5.0e-46 188.3 208 52.9
Carub.0006s1755 Capsella rubella HOM05D007243 ORTHO05D008795 1.5e-45 186.8 208 52.9
PSO210G6087 Papaver somniferum HOM05D007243 ORTHO05D008795 1.9e-45 186.4 217 50.7
Zm00001eb362300 Zea mays HOM05D007243 ORTHO05D008795 5.6e-45 184.9 203 50.2
PSO832G0154 Papaver somniferum HOM05D007243 ORTHO05D008795 2.8e-44 182.6 217 49.3
unitig_736.g22490 Utricularia gibba HOM05D007243 ORTHO05D008795 7.5e-42 174.5 216 47.7
ATR0006G025 Amborella trichopoda HOM05D007243 ORTHO05D008795 5.4e-40 168.3 204 48.5
EL10As3g23348 Beta vulgaris HOM05D007243 ORTHO05D008795 3.6e-36 155.6 186 48.4
Eucgr.H03569 Eucalyptus grandis HOM05D007243 ORTHO05D008795 3.1e-35 152.5 196 46.9
Nitab4.5_0000630g0110 Nicotiana tabacum HOM05D007243 ORTHO05D008795 8.9e-35 151.0 168 52.4
SEGI_00208 Sequoiadendron giganteum HOM05D007243 ORTHO05D008795 8.9e-35 151.0 223 42.2
Hund12173 Selenicereus undatus HOM05D007243 ORTHO05D008795 1.2e-34 150.6 184 48.4
Nitab4.5_0000968g0030 Nicotiana tabacum HOM05D007243 ORTHO05D008795 1.9e-32 143.3 208 45.7
Eucgr.H03567 Eucalyptus grandis HOM05D007243 ORTHO05D008795 2.4e-32 142.9 192 43.8
Sed0009204 Sechium edule HOM05D007243 ORTHO05D008795 9.2e-32 141.0 191 45.0
HPP92_010110 Vanilla planifolia HOM05D007243 ORTHO05D008795 1.2e-31 140.6 208 41.3
Lj3C742G23 Lonicera japonica HOM05D007243 ORTHO05D008795 4.6e-31 138.7 168 50.6
Pp3c6_17260 Physcomitrium patens HOM05D000032 ORTHO05D008795 2.6e-26 122.9 224 35.7
AagrBONN_evm.TU.Sc2ySwM_228.3218 Anthoceros agrestis HOM05D007243 ORTHO05D008795 2.1e-20 103.2 221 30.8
SMO146G0285 Selaginella moellendorffii HOM05D000032 ORTHO05D008795 3.1e-19 99.4 210 31.9
CDE01G0429 Ceratophyllum demersum HOM05D007243 ORTHO05D008795 9.0e-19 97.8 165 40.0
Mapoly0066s0058 Marchantia polymorpha HOM05D000032 ORTHO05D008795 4.5e-18 95.5 225 30.2
Eucgr.H03571 Eucalyptus grandis HOM05D007243 ORTHO05D008795 7.6e-18 94.7 98 52.0
CDE01G0152 Ceratophyllum demersum HOM05D002717 ORTHO05D002937 1.1e-16 90.9 57 73.7
AUR62038087 Chenopodium quinoa HOM05D007243 ORTHO05D008795 4.6e-15 85.5 54 72.2
CBR_g57658 Chara braunii HOM05D000019 ORTHO05D008795 6.0e-15 85.1 185 31.4
Glyma.17G015700 Glycine max HOM05D007243 ORTHO05D008795 2.6e-10 69.7 67 56.7
MBI19_g39604_MAGBIO Magnolia biondii HOM05D007243 ORTHO05D008795 6.0e-07 58.5 42 61.9


User provided reference genes

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