Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005035 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 3.5e-24 115.5 155 100.0
CSS0048267 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 4.3e-22 108.6 153 98.7
MSTRG.8816 Avicennia marina HOM05D003975 ORTHO05D009762 4.1e-12 75.5 47 68.1
Dinv28563 Davidia involucrata HOM05D003975 ORTHO05D009762 1.5e-11 73.6 41 80.5
Nitab4.5_0002149g0030 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.7e-10 70.1 47 66.0
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 1.7e-10 70.1 152 80.9
PGR142G2422 Punica granatum HOM05D003975 ORTHO05D009762 3.8e-10 68.9 46 60.9
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 8.5e-10 67.8 47 63.8
Rhsim09G0192100 Rhododendron simsii HOM05D000201 ORTHO05D000375 8.5e-10 67.8 47 68.1
Lj8C41T2 Lonicera japonica HOM05D003975 ORTHO05D009762 9.4e-09 64.3 47 61.7
SGA_v2.0_scaffold2G01188 Striga asiatica HOM05D003975 ORTHO05D009762 2.1e-08 63.2 47 57.4
Cc00_g07030 Coffea canephora HOM05D003975 ORTHO05D009762 3.6e-08 62.4 44 56.8
Sp2g25540 Schrenkiella parvula HOM05D003975 ORTHO05D009762 7.9e-08 61.2 47 59.6
Carub.0008s2305 Capsella rubella HOM05D003975 ORTHO05D009762 3.0e-07 59.3 43 58.1
Thhalv10003595m.g Eutrema salsugineum HOM05D003975 ORTHO05D009762 3.0e-07 59.3 47 55.3
Nitab4.5_0005512g0030 Nicotiana tabacum HOM05D000508 ORTHO05D000371 5.1e-07 58.5 42 61.9
AL8G39200 Arabidopsis lyrata HOM05D003975 ORTHO05D009762 6.7e-07 58.2 45 53.3
BcaNung03569 Brassica carinata HOM05D003975 ORTHO05D009762 1.5e-06 57.0 45 53.3
A01p18130 Brassica napus HOM05D003975 ORTHO05D009762 1.5e-06 57.0 45 53.3
C01p23090 Brassica napus HOM05D003975 ORTHO05D009762 1.5e-06 57.0 45 53.3
BolC1t02243H Brassica oleracea HOM05D003975 ORTHO05D009762 1.5e-06 57.0 45 53.3
BraA01t01768Z Brassica rapa HOM05D003975 ORTHO05D009762 1.5e-06 57.0 45 53.3
CARHR276150 Cardamine hirsuta HOM05D003975 ORTHO05D009762 2.5e-06 56.2 45 53.3


User provided reference genes

Program Settings