Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 4.4e-101 371.3 189 100.0
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.9e-96 355.9 189 97.9
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.7e-74 282.3 195 77.9
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.3e-72 275.4 195 76.9
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 7.3e-72 274.2 188 77.7
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.6e-71 271.9 195 76.4
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 6.8e-70 267.7 195 72.3
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 2.0e-69 266.2 191 72.8
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 5.8e-69 264.6 187 76.5
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 4.6e-66 255.0 189 69.8
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 6.0e-66 254.6 201 67.7
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.7e-65 253.1 194 68.6
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.7e-65 253.1 204 67.2
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.9e-65 251.9 194 68.6
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 3.9e-65 251.9 194 68.6
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 6.6e-65 251.1 194 69.6
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 8.6e-65 250.8 200 66.5
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 8.6e-65 250.8 196 67.9
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 4.3e-64 248.4 192 68.8
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 9.5e-64 247.3 184 70.7
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 2.1e-63 246.1 195 66.7
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 2.1e-63 246.1 203 66.0
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 3.6e-63 245.4 188 66.5
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 4.7e-63 245.0 194 68.0
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 1.4e-62 243.4 206 64.1
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.4e-62 243.4 199 64.3
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 1.8e-62 243.0 193 66.8
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 3.1e-62 242.3 192 67.7
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 4.0e-62 241.9 194 68.0
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 5.2e-62 241.5 192 66.1
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 8.9e-62 240.7 204 66.2
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.2e-61 240.4 195 66.7
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 2.0e-61 239.6 191 66.5
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 4.4e-61 238.4 195 65.6
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 2.2e-60 236.1 203 63.5
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 6.4e-60 234.6 191 64.4
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.9e-59 233.0 192 64.6
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 2.4e-59 232.6 199 65.3
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 2.4e-59 232.6 203 64.5
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 5.4e-59 231.5 196 65.3
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 7.0e-59 231.1 200 62.5
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 2.7e-58 229.2 193 66.8
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 3.9e-57 225.3 200 64.5
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 6.6e-57 224.6 180 66.1
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 1.1e-56 223.8 151 73.5
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.5e-56 223.4 162 72.8
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 1.9e-56 223.0 189 63.5
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 1.9e-56 223.0 205 62.4
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.9e-56 223.0 196 63.3
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 2.5e-56 222.6 194 63.9
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 4.3e-56 221.9 206 61.7
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 4.3e-56 221.9 178 68.0
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 5.6e-56 221.5 200 62.5
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 5.6e-56 221.5 194 62.9
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 7.3e-56 221.1 189 63.0
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.6e-55 219.9 203 59.6
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 1.6e-55 219.9 196 61.7
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.1e-55 219.5 186 64.5
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 2.8e-55 219.2 196 61.7
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 2.8e-55 219.2 192 63.0
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 4.7e-55 218.4 204 61.3
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 8.1e-55 217.6 188 61.7
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 1.8e-54 216.5 198 60.1
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 2.3e-54 216.1 209 58.4
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 4.0e-54 215.3 193 59.6
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 6.8e-54 214.5 203 59.1
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 6.8e-54 214.5 203 59.1
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 6.8e-54 214.5 203 59.1
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 6.8e-54 214.5 203 59.1
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 2.0e-53 213.0 203 58.6
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 2.0e-53 213.0 194 61.9
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 2.6e-53 212.6 142 78.2
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 2.6e-53 212.6 200 59.5
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 9.9e-53 210.7 153 73.2
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.3e-52 210.3 191 60.2
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.3e-52 210.3 197 62.4
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 3.7e-52 208.8 190 60.5
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 4.9e-52 208.4 185 58.9
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 6.4e-52 208.0 182 61.5
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 1.1e-51 207.2 195 60.5
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 7.1e-51 204.5 198 58.1
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 6.0e-50 201.4 196 59.7
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.3e-49 200.3 188 59.6
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.3e-49 200.3 186 60.2
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.7e-49 199.9 190 55.3
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 1.7e-49 199.9 193 58.5
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 3.0e-49 199.1 189 60.3
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 4.3e-48 195.3 203 57.6
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 7.3e-48 194.5 189 54.5
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 4.7e-47 191.8 190 57.9
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 4.7e-47 191.8 199 55.3
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 8.1e-47 191.0 178 55.6
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 6.8e-46 188.0 201 51.2
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 2.0e-45 186.4 199 51.3
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 2.2e-44 183.0 201 53.2
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 2.2e-44 183.0 207 51.7
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 6.4e-44 181.4 200 50.5
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 6.4e-44 181.4 151 58.9
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.9e-43 179.9 143 62.9
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 7.1e-43 177.9 203 51.7
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 1.6e-39 166.8 155 53.5
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 8.7e-33 144.4 160 46.2
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 9.6e-32 141.0 157 50.3
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.9e-28 129.4 93 67.7
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.1e-19 100.9 111 50.5
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 2.5e-19 99.8 154 35.1
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 3.2e-19 99.4 100 55.0
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 3.5e-18 95.9 74 68.9
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.3e-17 93.2 149 34.9
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.3e-17 93.2 137 34.3
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 4.3e-16 89.0 149 35.6
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 4.8e-15 85.5 126 42.1
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 2.6e-13 79.7 140 34.3
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.2e-12 76.6 150 32.0
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 4.9e-12 75.5 164 31.1
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 6.5e-12 75.1 67 55.2


User provided reference genes

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