Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-96 356.3 172 100.0
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-49 200.3 126 81.7
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-49 200.3 126 81.7
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-48 196.8 127 78.7
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-44 183.7 126 76.2
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-41 173.7 127 73.2
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.8e-38 161.8 126 64.3
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-37 159.8 126 63.5
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.4e-37 159.5 126 63.5
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.3e-37 158.3 125 63.2
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.9e-37 157.9 125 63.2
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-29 133.7 112 65.2
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.6e-28 127.9 111 59.5
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.0e-27 127.5 128 56.2
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.5e-27 124.8 81 72.8
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.6e-25 120.2 110 57.3
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.2e-22 109.8 121 48.8
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.2e-19 99.8 112 50.9
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.0e-15 86.7 107 46.7
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.2e-14 81.3 72 54.2
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 6.9e-13 78.2 133 38.3
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.6e-12 76.3 52 71.2
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 3.2e-10 69.3 126 34.1
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 1.2e-09 67.4 128 34.4
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.0e-08 64.3 117 30.8
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 2.3e-08 63.2 101 36.6
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 5.2e-08 62.0 121 38.8
Rhsim13G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.2e-08 62.0 58 53.4
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 6.7e-08 61.6 101 35.6
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 1.5e-07 60.5 117 30.8
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.5e-07 60.5 121 32.2
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.0e-07 60.1 80 41.2
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 2.0e-07 60.1 117 30.8
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 2.6e-07 59.7 124 30.6
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 4.4e-07 58.9 77 45.5
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 4.4e-07 58.9 77 45.5
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.4e-07 58.9 115 35.7
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 7.4e-07 58.2 88 35.2
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 7.4e-07 58.2 121 33.1
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 1.3e-06 57.4 98 34.7
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.3e-06 57.4 110 35.5
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 2.2e-06 56.6 127 35.4
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.2e-06 56.6 69 44.9
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 2.8e-06 56.2 72 43.1
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.8e-06 56.2 114 34.2
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.8e-06 56.2 114 34.2
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.8e-06 55.5 116 37.9
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.3e-06 55.1 120 34.2
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.3e-06 55.1 119 34.5
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.3e-06 55.1 119 33.6
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 8.2e-06 54.7 123 33.3
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 8.2e-06 54.7 93 35.5
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 8.2e-06 54.7 69 39.1


User provided reference genes

Program Settings