Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 8.4e-102 373.6 181 100.0
CSS0004472 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.4e-43 180.3 178 56.2
CSS0003705 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.3e-38 162.9 183 52.5
CSS0045933 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.9e-38 162.5 179 53.1
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-18 97.4 119 50.4
CSS0019089 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.0e-18 96.7 98 57.1
CSS0018430 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.9e-18 94.4 112 50.9
CSS0004175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.9e-17 92.0 92 57.6
CSS0029205 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.9e-17 92.0 92 57.6
CSS0042827 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.9e-17 92.0 92 57.6
CSS0043832 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 8.3e-17 91.3 92 57.6
CSS0036809 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.1e-16 90.9 92 57.6
CSS0008160 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.9e-16 90.1 92 57.6
CSS0024446 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.4e-16 89.7 119 47.1
CSS0016236 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.6e-15 87.0 92 56.5
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.6e-15 87.0 118 46.6
CSS0036689 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.3e-14 84.0 94 55.3
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 5.1e-14 82.0 108 49.1
CSS0010354 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.5e-13 79.7 109 47.7
CSS0032039 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 6.2e-12 75.1 98 50.0
CSS0022512 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 6.8e-11 71.6 95 49.5
CSS0048981 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 6.8e-11 71.6 51 68.6
Hma1.2p1_0381F.1_g140020 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 7.6e-10 68.2 87 41.4
CSS0009117 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.9e-09 66.2 99 44.4
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 1.4e-08 63.9 118 33.9
Hma1.2p1_1167F.1_g263020 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.4e-08 63.2 98 37.8
CSS0041871 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.1e-08 61.6 80 50.0
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 7.8e-07 58.2 109 33.0
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 3.0e-06 56.2 123 30.1
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 3.9e-06 55.8 115 33.9
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 3.9e-06 55.8 115 33.9
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.6e-06 55.1 128 30.5


User provided reference genes

Program Settings