Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004974 Camellia sinensis var. sinensis HOM05D051379 ORTHO05D000384 5.8e-86 320.9 161 100.0
CSS0029315 Camellia sinensis var. sinensis HOM05D051379 ORTHO05D000384 3.5e-43 178.7 106 86.8
CSS0031302 Camellia sinensis var. sinensis HOM05D000521 ORTHO05D000384 4.9e-37 158.3 144 60.4
CSS0042756 Camellia sinensis var. sinensis HOM05D000521 ORTHO05D000384 1.1e-36 157.1 176 55.1
Dinv31660 Davidia involucrata HOM05D000521 ORTHO05D000384 2.7e-11 72.8 195 35.4
Actinidia31278 Actinidia chinensis HOM05D000521 ORTHO05D000384 8.0e-11 71.2 190 35.3
Actinidia05445 Actinidia chinensis HOM05D000521 ORTHO05D000384 2.3e-10 69.7 137 43.1
Atru.chr8.1596 Acer truncatum HOM05D000521 ORTHO05D000384 2.0e-09 66.6 182 35.2
MBI17_g38596_MAGBIO Magnolia biondii HOM05D000521 ORTHO05D000384 1.7e-08 63.5 131 38.9
Thecc.05G085100 Theobroma cacao HOM05D000521 ORTHO05D000384 2.8e-08 62.8 204 33.3
Ciclev10011627m.g Citrus clementina HOM05D000521 ORTHO05D000384 4.8e-08 62.0 183 32.8
vmacro07390 Vaccinium macrocarpon HOM05D000521 ORTHO05D000384 4.8e-08 62.0 87 50.6
Gorai.002G158900 Gossypium raimondii HOM05D000521 ORTHO05D000384 6.3e-08 61.6 210 34.3
Peaxi162Scf00752g00410 Petunia axillaris HOM05D000521 ORTHO05D000384 6.3e-08 61.6 131 39.7
Gohir.D01G128300 Gossypium hirsutum HOM05D000521 ORTHO05D000384 8.2e-08 61.2 210 34.3
Nitab4.5_0000794g0140 Nicotiana tabacum HOM05D000521 ORTHO05D000384 1.1e-07 60.8 201 32.3
MSTRG.5822 Avicennia marina HOM05D000521 ORTHO05D000384 1.4e-07 60.5 109 42.2
CSS0004239 Camellia sinensis var. sinensis HOM05D000521 ORTHO05D000384 1.4e-07 60.5 115 39.1
CSS0028468 Camellia sinensis var. sinensis HOM05D000521 ORTHO05D000384 1.4e-07 60.5 115 39.1
Gohir.A01G138600 Gossypium hirsutum HOM05D000521 ORTHO05D000384 1.4e-07 60.5 200 32.5
Nitab4.5_0012320g0010 Nicotiana tabacum HOM05D000521 ORTHO05D000384 1.4e-07 60.5 179 35.2
MBI01_g11649_MAGBIO Magnolia biondii HOM05D000521 ORTHO05D000384 1.8e-07 60.1 176 32.4
SGA_v2.0_scaffold75G24765 Striga asiatica HOM05D000521 ORTHO05D000384 3.1e-07 59.3 110 40.9
CANSAT80G2011 Cannabis sativa HOM05D000521 ORTHO05D000384 5.3e-07 58.5 197 31.5
CAN.G1099.14 Capsicum annuum HOM05D000521 ORTHO05D000384 5.3e-07 58.5 109 43.1
Duzib093G1158 Durio zibethinus HOM05D000521 ORTHO05D000384 5.3e-07 58.5 203 32.0
RcHm_v2.0_Chr3g0472641 Rosa chinensis HOM05D000521 ORTHO05D000384 5.3e-07 58.5 181 34.8
CAN.G397.47 Capsicum annuum HOM05D000521 ORTHO05D000384 7.0e-07 58.2 111 41.4
Solyc10g085610.2 Solanum lycopersicum HOM05D000521 ORTHO05D000384 7.0e-07 58.2 109 43.1
Sopen10g035020 Solanum pennellii HOM05D000521 ORTHO05D000384 7.0e-07 58.2 109 43.1
Nitab4.5_0000381g0250 Nicotiana tabacum HOM05D000521 ORTHO05D000384 9.1e-07 57.8 174 34.5
Oeu009898.1 Olea europaea HOM05D000521 ORTHO05D000384 9.1e-07 57.8 97 43.3
Nitab4.5_0011780g0010 Nicotiana tabacum HOM05D000521 ORTHO05D000384 1.2e-06 57.4 179 33.0
PGR044G2407 Punica granatum HOM05D000521 ORTHO05D000384 1.2e-06 57.4 110 40.0
Dinv04015 Davidia involucrata HOM05D000521 ORTHO05D000384 1.6e-06 57.0 90 42.2
Dinv21231 Davidia involucrata HOM05D000521 ORTHO05D000384 1.6e-06 57.0 180 32.2
Gorai.007G370500 Gossypium raimondii HOM05D000521 ORTHO05D000384 1.6e-06 57.0 185 34.1
Hma1.2p1_0084F.1_g043450 Hydrangea macrophylla HOM05D000521 ORTHO05D000384 1.6e-06 57.0 109 41.3
Hma1.2p1_2087F.1_g313810 Hydrangea macrophylla HOM05D000521 ORTHO05D000384 1.6e-06 57.0 109 41.3
Lj3C929T10 Lonicera japonica HOM05D000521 ORTHO05D000384 1.6e-06 57.0 117 38.5
Manes.09G059000 Manihot esculenta HOM05D000521 ORTHO05D000384 1.6e-06 57.0 117 39.3
SGA_v2.0_scaffold192G40623 Striga asiatica HOM05D000521 ORTHO05D000384 2.0e-06 56.6 90 42.2
COL.COLO4_29785 Corchorus olitorius HOM05D000521 ORTHO05D000384 2.6e-06 56.2 124 39.5
Dinv37899 Davidia involucrata HOM05D000521 ORTHO05D000384 2.6e-06 56.2 90 42.2
Duzib106G0760 Durio zibethinus HOM05D000521 ORTHO05D000384 2.6e-06 56.2 201 32.8
Lalb_Chr21g0315471 Lupinus albus HOM05D000521 ORTHO05D000384 2.6e-06 56.2 177 32.8
Solyc09g009770.3 Solanum lycopersicum HOM05D000521 ORTHO05D000384 2.6e-06 56.2 205 31.7
Aqoxy39s003 Aquilegia oxysepala HOM05D000521 ORTHO05D000384 3.5e-06 55.8 80 45.0
Haze_15982 Corylus avellana HOM05D000521 ORTHO05D000384 3.5e-06 55.8 89 41.6
ECA233G5823 Erigeron canadensis HOM05D000521 ORTHO05D000384 3.5e-06 55.8 79 46.8
HanXRQChr12g0382071 Helianthus annuus HOM05D000521 ORTHO05D000384 3.5e-06 55.8 71 49.3
Sopen09g004530 Solanum pennellii HOM05D000521 ORTHO05D000384 3.5e-06 55.8 205 32.7
Ca_11638_v3 Cicer arietinum L. HOM05D000521 ORTHO05D000384 4.5e-06 55.5 177 31.1
Gohir.D11G340600 Gossypium hirsutum HOM05D000521 ORTHO05D000384 4.5e-06 55.5 144 38.2
Rhsim03G0078200 Rhododendron simsii HOM05D000521 ORTHO05D000384 4.5e-06 55.5 96 45.8
Cfa003564 Carpinus fangiana HOM05D000521 ORTHO05D000384 5.9e-06 55.1 83 42.2
FAN02G0272 Fragaria x ananassa HOM05D000521 ORTHO05D000384 5.9e-06 55.1 184 34.8
Nn6g34988 Nelumbo nucifera HOM05D000521 ORTHO05D000384 5.9e-06 55.1 123 38.2
Nitab4.5_0002039g0050 Nicotiana tabacum HOM05D000521 ORTHO05D000384 5.9e-06 55.1 91 42.9
Peaxi162Scf00096g00026 Petunia axillaris HOM05D000521 ORTHO05D000384 5.9e-06 55.1 178 34.3
Sed0015427 Sechium edule HOM05D000521 ORTHO05D000384 5.9e-06 55.1 121 39.7
A04p06610 Brassica napus HOM05D000521 ORTHO05D000384 7.7e-06 54.7 115 37.4
BraA04t16365Z Brassica rapa HOM05D000521 ORTHO05D000384 7.7e-06 54.7 115 37.4
CsaV3_3G037080 Cucumis sativus L. HOM05D000521 ORTHO05D000384 7.7e-06 54.7 113 37.2
Dinv28002 Davidia involucrata HOM05D000521 ORTHO05D000384 7.7e-06 54.7 93 41.9
Oeu052886.1 Olea europaea HOM05D000521 ORTHO05D000384 7.7e-06 54.7 105 41.0
Sed0017916 Sechium edule HOM05D000521 ORTHO05D000384 7.7e-06 54.7 167 33.5
PGSC0003DMG400008882 Solanum tuberosum HOM05D000521 ORTHO05D000384 7.7e-06 54.7 152 36.2


User provided reference genes

Program Settings