Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 0.0e+00 1093.6 573 100.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.4e-259 898.7 573 82.4
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.3e-257 892.9 573 82.7
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 9.1e-251 870.2 596 77.9
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.6e-234 816.2 573 76.6
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 2.1e-231 805.8 570 74.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 2.2e-228 795.8 573 73.8
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.4e-227 793.1 577 75.2
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 2.9e-225 785.4 575 73.0
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 2.9e-225 785.4 574 73.3
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.1e-224 783.5 569 73.5
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 3.2e-224 781.9 573 72.6
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 9.5e-224 780.4 572 73.1
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 9.5e-224 780.4 572 73.1
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.2e-223 780.0 592 69.1
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 6.1e-223 777.7 569 73.5
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 3.0e-222 775.4 573 72.1
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 4.0e-222 775.0 573 71.7
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 3.4e-221 771.9 573 70.9
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 7.5e-221 770.8 574 73.0
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 9.8e-221 770.4 573 72.1
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.3e-220 770.0 573 70.7
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 2.2e-220 769.2 573 73.3
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 3.7e-220 768.5 573 70.9
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 4.9e-220 768.1 572 70.6
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 8.3e-220 767.3 530 77.7
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 7.0e-219 764.2 560 71.1
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 2.7e-218 762.3 565 71.0
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.5e-218 761.9 573 72.6
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.3e-217 759.2 573 72.6
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.9e-217 758.8 569 71.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.6e-217 757.7 588 71.3
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-216 756.9 573 72.1
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.5e-216 755.7 572 71.5
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.5e-216 755.7 569 71.0
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.3e-216 755.4 569 71.2
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 3.3e-216 755.4 573 71.4
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 5.6e-216 754.6 573 68.6
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 8.0e-215 750.7 568 72.7
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 3.0e-214 748.8 573 70.0
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 3.0e-214 748.8 572 69.2
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 3.0e-214 748.8 573 69.5
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.2e-213 746.9 573 69.8
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.2e-213 746.9 555 70.5
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 4.4e-213 745.0 571 68.0
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.3e-212 743.4 573 69.1
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 8.3e-212 740.7 573 70.3
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 8.3e-212 740.7 573 71.6
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.1e-211 740.3 573 69.6
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.8e-211 739.6 577 68.8
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 5.4e-211 738.0 573 68.6
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.6e-210 736.5 574 67.9
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.6e-210 736.5 578 68.0
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 2.0e-210 736.1 573 68.2
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 5.9e-210 734.6 573 67.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.3e-209 733.4 575 71.3
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.3e-209 733.4 573 68.9
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.7e-209 733.0 573 68.2
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 3.9e-209 731.9 571 67.3
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 5.0e-209 731.5 569 68.2
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 7.3e-208 727.6 574 68.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.2e-207 726.9 573 67.9
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 3.6e-207 725.3 571 67.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 8.9e-206 720.7 574 67.6
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 5.4e-203 711.4 574 65.9
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 5.4e-203 711.4 574 65.7
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.2e-202 710.3 573 66.0
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 3.5e-202 708.8 645 61.2
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 2.3e-201 706.1 573 65.1
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 8.6e-201 704.1 574 66.9
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.5e-200 703.4 573 65.6
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.2e-197 693.7 573 65.3
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.5e-197 693.3 573 64.7
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 5.8e-197 691.4 573 65.3
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.9e-195 686.4 569 66.4
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 7.1e-195 684.5 574 65.2
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 3.5e-194 682.2 574 64.3
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.0e-193 680.6 529 68.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.0e-193 680.6 573 64.2
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 3.9e-193 678.7 574 64.5
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.2e-191 673.7 573 64.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 6.8e-190 667.9 569 64.7
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 7.8e-186 654.4 486 72.4
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 9.0e-182 641.0 576 60.6
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.6e-178 630.2 572 60.1
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 7.8e-178 627.9 573 61.3
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 7.8e-178 627.9 573 61.3
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 2.3e-177 626.3 573 61.1
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 3.0e-177 625.9 574 61.1
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 3.0e-177 625.9 574 61.1
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 8.7e-177 624.4 571 60.8
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 2.5e-176 622.9 528 63.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.5e-176 622.9 575 57.6
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.2e-172 609.8 642 54.4
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 2.8e-167 592.8 511 62.6
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 2.6e-141 506.5 415 64.1
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 8.0e-130 468.4 457 58.9
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 5.5e-115 419.1 594 41.2
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.4e-112 409.8 417 57.6
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 7.5e-112 408.7 560 44.1
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 2.0e-101 374.0 313 67.4
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.0e-101 374.0 302 69.9
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.9e-100 370.2 238 80.3
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.8e-97 360.9 597 38.4
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.7e-95 354.4 594 38.2
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.6e-93 347.8 564 38.5
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 8.6e-92 342.0 225 76.9
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.5e-83 314.7 261 67.0
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 5.1e-76 289.7 381 51.2
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 4.7e-74 283.1 267 57.7
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 3.3e-67 260.4 242 55.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 8.1e-58 229.2 172 71.5
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.1e-53 214.5 595 32.1
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 9.6e-43 179.1 585 27.7
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 8.2e-42 176.0 151 62.9
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.5e-35 155.2 157 62.4
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.7e-23 115.2 71 74.6
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 2.4e-17 94.7 56 89.3
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.6e-08 65.5 42 76.2
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.0e-08 65.1 79 44.3


User provided reference genes

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