Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004960 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 2.9e-92 343.2 262 100.0
CSS0048267 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 4.2e-91 339.3 262 98.5
Rhsim09G0192100 Rhododendron simsii HOM05D000201 ORTHO05D000375 5.0e-44 183.0 138 66.7
Sabra15G0048500 Salix brachista HOM05D003975 ORTHO05D009762 3.3e-43 180.3 262 57.6
Dinv28563 Davidia involucrata HOM05D003975 ORTHO05D009762 4.2e-43 179.9 129 72.1
Sabra15G0045800 Salix brachista HOM05D003975 ORTHO05D009762 7.2e-43 179.1 262 57.6
Sabra15G0053100 Salix brachista HOM05D003975 ORTHO05D009762 1.2e-42 178.3 262 54.6
Sabra15G0060200 Salix brachista HOM05D003975 ORTHO05D009762 1.2e-42 178.3 262 56.9
Sabra15G0031500 Salix brachista HOM05D003975 ORTHO05D009762 2.1e-42 177.6 262 58.8
Sabra15G0044600 Salix brachista HOM05D003975 ORTHO05D009762 2.1e-42 177.6 262 58.0
QL09p019427 Quercus lobata HOM05D003975 ORTHO05D009762 3.6e-42 176.8 259 66.0
Sabra15G0054000 Salix brachista HOM05D003975 ORTHO05D009762 3.6e-42 176.8 262 55.0
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 4.7e-42 176.4 262 55.3
Sabra15G0046400 Salix brachista HOM05D003975 ORTHO05D009762 1.4e-41 174.9 262 56.9
Sabra15G0052100 Salix brachista HOM05D003975 ORTHO05D009762 1.4e-41 174.9 262 65.3
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 3.0e-41 173.7 139 64.7
GSVIVG01018516001 Vitis vinifera HOM05D003975 ORTHO05D009762 2.2e-39 167.5 138 63.0
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 2.9e-39 167.2 264 61.4
Atru.chr1.699 Acer truncatum HOM05D003975 ORTHO05D009762 8.3e-39 165.6 139 60.4
Potri.004G200900 Populus trichocarpa HOM05D003975 ORTHO05D009762 8.3e-39 165.6 264 51.1
Atru.chr1.696 Acer truncatum HOM05D003975 ORTHO05D009762 1.8e-38 164.5 141 58.2
Lj8C41T2 Lonicera japonica HOM05D003975 ORTHO05D009762 3.1e-33 147.1 136 53.7
Haze_13863 Corylus avellana HOM05D003975 ORTHO05D009762 2.2e-31 141.0 119 62.2
PGSC0003DMG402014825 Solanum tuberosum HOM05D003975 ORTHO05D009762 2.9e-31 140.6 139 52.5
CAN.G48.19 Capsicum annuum HOM05D003975 ORTHO05D009762 8.3e-31 139.0 140 52.1
ECA233G1567 Erigeron canadensis HOM05D003975 ORTHO05D009762 1.4e-30 138.3 130 54.6
Sopen03g023950 Solanum pennellii HOM05D003975 ORTHO05D009762 4.1e-30 136.7 133 53.4
DCAR_029158 Daucus carota HOM05D003975 ORTHO05D009762 1.2e-29 135.2 139 51.8
CANSAT11G0896 Cannabis sativa HOM05D003975 ORTHO05D009762 2.7e-29 134.0 114 58.8
Solyc03g093150.3 Solanum lycopersicum HOM05D003975 ORTHO05D009762 2.7e-29 134.0 133 51.9
Thecc.03G157100 Theobroma cacao HOM05D003975 ORTHO05D009762 3.5e-29 133.7 262 62.6
Ciclev10004237m.g Citrus clementina HOM05D003975 ORTHO05D009762 4.6e-29 133.3 141 52.5
Lsat_1_v5_gn_8_8880 Lactuca sativa HOM05D003975 ORTHO05D009762 6.0e-29 132.9 131 51.1
HanXRQChr05g0142511 Helianthus annuus HOM05D003975 ORTHO05D009762 1.5e-27 128.3 131 48.9
Cfa008191 Carpinus fangiana HOM05D003975 ORTHO05D009762 2.5e-27 127.5 112 59.8
Nitab4.5_0002816g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 7.3e-27 125.9 120 53.3
Nitab4.5_0009543g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 6.2e-26 122.9 117 53.8
Gohir.A03G058201 Gossypium hirsutum HOM05D003975 ORTHO05D009762 1.1e-25 122.1 258 62.0
Cc00_g07030 Coffea canephora HOM05D003975 ORTHO05D009762 5.2e-25 119.8 133 48.1
TWI39G0436 Tripterygium wilfordii HOM05D003975 ORTHO05D009762 6.8e-25 119.4 114 53.5
Nitab4.5_0002556g0070 Nicotiana tabacum HOM05D003975 ORTHO05D009762 8.9e-25 119.0 135 46.7
COL.COLO4_14135 Corchorus olitorius HOM05D003975 ORTHO05D009762 1.2e-24 118.6 116 56.0
CiPaw.03G094900 Carya illinoinensis HOM05D003975 ORTHO05D009762 3.4e-24 117.1 111 55.9
Peaxi162Scf00241g00015 Petunia axillaris HOM05D003975 ORTHO05D009762 3.4e-24 117.1 120 51.7
Thhalv10003595m.g Eutrema salsugineum HOM05D003975 ORTHO05D009762 9.8e-24 115.5 263 49.4
CsaV3_3G016180 Cucumis sativus L. HOM05D003975 ORTHO05D009762 1.1e-22 112.1 115 54.8
CARHR276150 Cardamine hirsuta HOM05D003975 ORTHO05D009762 2.4e-22 110.9 141 41.1
AL8G39200 Arabidopsis lyrata HOM05D003975 ORTHO05D009762 3.2e-22 110.5 264 40.2
THA.LOC104821407 Tarenaya hassleriana HOM05D003975 ORTHO05D009762 5.4e-22 109.8 262 60.3
TAR375G0346 Trochodendron aralioides HOM05D003975 ORTHO05D009762 7.1e-22 109.4 111 54.1
MELO3C006816.2 Cucumis melo HOM05D003975 ORTHO05D009762 2.1e-21 107.8 114 54.4
PGR142G2422 Punica granatum HOM05D003975 ORTHO05D009762 2.1e-21 107.8 119 48.7
Oeu023215.2 Olea europaea HOM05D003975 ORTHO05D009762 7.8e-21 105.9 122 48.4
Nitab4.5_0002149g0030 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.3e-20 105.1 265 30.9
AT5G62370 Arabidopsis thaliana HOM05D003975 ORTHO05D009762 2.3e-20 104.4 141 38.3
Manes.15G055100 Manihot esculenta HOM05D003975 ORTHO05D009762 3.0e-20 104.0 262 56.1
Sp2g25540 Schrenkiella parvula HOM05D003975 ORTHO05D009762 3.0e-20 104.0 263 30.4
SGA_v2.0_scaffold2G01188 Striga asiatica HOM05D003975 ORTHO05D009762 3.0e-20 104.0 117 51.3
Carub.0008s2305 Capsella rubella HOM05D003975 ORTHO05D009762 6.6e-20 102.8 141 39.0
Gohir.D03G107900 Gossypium hirsutum HOM05D003975 ORTHO05D009762 6.6e-20 102.8 110 53.6
Gorai.003G114200 Gossypium raimondii HOM05D003975 ORTHO05D009762 6.6e-20 102.8 110 53.6
Migut.F00464 Erythranthe guttata HOM05D003975 ORTHO05D009762 4.3e-19 100.1 126 46.8
A01p18130 Brassica napus HOM05D003975 ORTHO05D009762 2.8e-18 97.4 141 36.9
BraA01t01768Z Brassica rapa HOM05D003975 ORTHO05D009762 2.8e-18 97.4 141 36.9
BcaNung03569 Brassica carinata HOM05D003975 ORTHO05D009762 3.6e-18 97.1 141 37.6
C01p23090 Brassica napus HOM05D003975 ORTHO05D009762 3.6e-18 97.1 141 37.6
BolC1t02243H Brassica oleracea HOM05D003975 ORTHO05D009762 3.6e-18 97.1 141 37.6
MSTRG.8816 Avicennia marina HOM05D003975 ORTHO05D009762 1.8e-17 94.7 106 47.2
Eucgr.D00222 Eucalyptus grandis HOM05D003975 ORTHO05D009762 2.0e-16 91.3 123 42.3
Nn1g01091 Nelumbo nucifera HOM05D003975 ORTHO05D009762 1.3e-15 88.6 120 40.0
Sed0001623 Sechium edule HOM05D003975 ORTHO05D009762 2.2e-15 87.8 88 53.4
Duzib205G1466 Durio zibethinus HOM05D003975 ORTHO05D009762 2.9e-15 87.4 95 51.6
QL05p001270 Quercus lobata HOM05D003975 ORTHO05D009762 1.1e-14 85.5 258 30.2
MBI04_g11438_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009762 1.6e-13 81.6 96 51.0
Aqoxy6G00092 Aquilegia oxysepala HOM05D003975 ORTHO05D009762 5.1e-12 76.6 139 33.1
ATR0743G137 Amborella trichopoda HOM05D003975 ORTHO05D009762 8.1e-10 69.3 109 41.3
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 1.1e-09 68.9 81 50.6
ATR0743G010 Amborella trichopoda HOM05D003975 ORTHO05D009762 6.8e-09 66.2 108 40.7


User provided reference genes

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