Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 4.1e-173 611.3 308 100.0
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.8e-171 604.7 308 98.7
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.8e-171 604.7 308 98.7
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 4.0e-144 515.0 309 82.5
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 1.5e-138 496.5 306 77.8
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 1.2e-137 493.4 308 77.9
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 1.6e-137 493.0 309 79.0
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 4.7e-137 491.5 309 77.7
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 2.3e-136 489.2 308 77.3
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 4.0e-136 488.4 309 76.7
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 6.8e-136 487.6 306 76.8
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 1.2e-135 486.9 306 76.1
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 2.6e-135 485.7 305 78.4
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 3.4e-135 485.3 310 76.1
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 9.8e-135 483.8 306 76.5
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 1.3e-134 483.4 309 77.3
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 1.7e-134 483.0 313 77.0
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 2.2e-134 482.6 308 74.4
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 2.9e-134 482.3 306 76.5
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 6.4e-134 481.1 308 75.3
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 8.3e-134 480.7 303 75.9
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 7.0e-133 477.6 309 76.7
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 9.2e-133 477.2 310 76.1
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 9.2e-133 477.2 308 74.4
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 1.2e-132 476.9 308 73.4
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 1.6e-132 476.5 309 75.4
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 1.6e-132 476.5 309 76.7
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 2.7e-132 475.7 309 75.7
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 3.5e-132 475.3 306 73.9
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 3.5e-132 475.3 310 75.5
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 6.0e-132 474.6 309 75.1
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 6.0e-132 474.6 302 77.5
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 1.0e-131 473.8 307 75.9
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 1.3e-131 473.4 319 74.0
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.3e-131 473.4 310 75.8
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 3.9e-131 471.9 311 75.2
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 3.9e-131 471.9 308 73.7
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 5.0e-131 471.5 306 76.1
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 5.0e-131 471.5 339 71.4
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 6.6e-131 471.1 310 74.8
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 1.9e-130 469.5 308 73.7
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 1.9e-130 469.5 309 73.1
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 1.9e-130 469.5 307 73.3
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 3.3e-130 468.8 309 73.8
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 1.6e-129 466.5 303 75.6
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 2.1e-129 466.1 305 74.8
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 2.1e-129 466.1 310 74.2
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 2.8e-129 465.7 309 72.5
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 3.6e-129 465.3 309 75.4
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 2.3e-128 462.6 306 74.8
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 8.9e-128 460.7 308 73.7
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.5e-127 459.9 308 72.1
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 3.4e-127 458.8 308 73.1
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 7.5e-127 457.6 306 72.9
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 2.9e-126 455.7 305 73.1
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 3.7e-126 455.3 309 70.9
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 2.4e-125 452.6 310 72.9
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 2.4e-125 452.6 316 70.6
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 2.4e-125 452.6 349 65.0
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 3.2e-125 452.2 305 73.1
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 4.1e-125 451.8 304 73.4
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 4.1e-125 451.8 310 72.3
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 5.4e-125 451.4 310 72.3
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 7.1e-125 451.1 305 72.8
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 1.2e-124 450.3 304 73.0
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 2.1e-124 449.5 305 72.8
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 2.7e-124 449.1 310 71.6
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 3.5e-124 448.7 309 69.9
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 6.0e-124 448.0 310 72.3
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 7.8e-124 447.6 306 69.6
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 1.0e-123 447.2 311 71.7
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 1.0e-123 447.2 308 71.1
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 1.3e-123 446.8 324 68.2
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 1.7e-123 446.4 305 72.8
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 1.7e-123 446.4 307 71.3
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.7e-123 446.4 310 71.3
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.7e-123 446.4 310 71.3
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 2.3e-123 446.0 306 69.9
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 1.5e-122 443.4 387 62.0
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.9e-122 443.0 289 76.1
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 4.3e-122 441.8 307 71.0
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 9.5e-122 440.7 305 71.8
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 8.1e-121 437.6 306 72.2
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 1.1e-120 437.2 276 74.6
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.1e-120 437.2 311 69.5
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.1e-120 437.2 311 69.5
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 1.8e-120 436.4 305 69.2
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 5.2e-120 434.9 308 71.4
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 5.8e-119 431.4 310 69.0
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 9.9e-119 430.6 305 68.2
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 2.2e-118 429.5 305 69.8
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 3.8e-118 428.7 326 67.2
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 1.9e-117 426.4 330 63.3
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 2.4e-117 426.0 244 84.0
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 2.8e-113 412.5 300 66.7
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 8.1e-113 411.0 240 85.4
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 9.0e-112 407.5 278 73.0
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 2.0e-111 406.4 304 68.8
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 4.4e-111 405.2 308 68.8
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 4.4e-111 405.2 306 63.4
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.1e-108 396.4 284 69.0
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 6.6e-107 391.3 309 65.4
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 1.4e-104 383.6 251 75.7
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 6.9e-96 354.8 305 60.3
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 1.2e-95 354.0 241 71.4
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 3.9e-91 339.0 301 56.8
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 4.3e-90 335.5 231 73.2
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 2.4e-88 329.7 295 55.6
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 9.0e-88 327.8 228 71.9
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 7.9e-84 314.7 303 53.8
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 1.5e-79 300.4 293 53.6
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.1e-72 276.2 147 94.6
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.1e-69 267.7 145 94.5
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 8.8e-67 258.1 291 46.4
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 9.1e-56 221.5 180 58.3
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 9.4e-53 211.5 289 39.8
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 5.2e-51 205.7 318 40.3
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 5.7e-50 202.2 156 60.3
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.4e-43 181.0 184 58.7
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.8e-40 170.6 149 64.4
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 1.4e-35 154.5 149 56.4
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.3e-30 137.9 134 54.5
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 2.1e-28 130.6 95 64.2
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 4.0e-27 126.3 96 62.5
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 2.5e-21 107.1 59 83.1
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.8e-20 103.6 66 71.2
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.2e-17 94.0 68 61.8
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.9e-17 93.6 69 60.9
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.9e-16 90.9 64 62.5
DCAR_021657 Daucus carota HOM05D000572 ORTHO05D002399 1.3e-06 58.2 31 83.9


User provided reference genes

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