Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.7e-123 445.3 293 100.0
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 1.0e-96 357.5 210 87.6
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 2.3e-93 346.3 207 86.5
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 4.1e-90 335.5 211 84.4
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 9.2e-90 334.3 210 82.9
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 4.5e-89 332.0 289 66.4
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 4.5e-89 332.0 210 81.4
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 4.5e-89 332.0 210 81.4
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 5.9e-89 331.6 286 74.5
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.3e-88 330.5 289 68.2
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.9e-88 329.3 210 81.4
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 5.0e-88 328.6 287 65.9
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 6.6e-88 328.2 283 67.1
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 6.6e-88 328.2 213 82.2
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.1e-87 327.4 173 99.4
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 2.5e-87 326.2 211 80.6
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 3.3e-87 325.9 286 63.6
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 4.3e-87 325.5 288 63.5
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 7.3e-87 324.7 213 81.7
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.2e-86 323.9 208 81.2
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.1e-86 323.2 213 81.2
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.1e-86 323.2 210 79.0
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 3.6e-86 322.4 210 79.0
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 4.7e-86 322.0 213 80.8
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 6.1e-86 321.6 242 74.0
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 6.1e-86 321.6 289 66.8
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 8.0e-86 321.2 213 80.8
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 1.4e-85 320.5 213 80.3
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.3e-85 319.7 205 80.5
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 4.0e-85 318.9 213 80.8
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 5.2e-85 318.5 207 80.2
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 5.2e-85 318.5 211 80.1
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 6.8e-85 318.2 285 63.5
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 2.6e-84 316.2 205 79.5
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.4e-84 315.5 210 78.1
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 4.4e-84 315.5 286 65.4
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 5.8e-84 315.1 213 78.9
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.3e-83 313.9 205 79.0
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 2.2e-83 313.2 213 78.9
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.9e-83 312.8 211 77.7
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 6.4e-83 311.6 213 80.3
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 6.4e-83 311.6 287 59.6
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.1e-82 310.8 295 64.4
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.4e-82 310.5 294 60.2
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 1.9e-82 310.1 196 81.6
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 1.9e-82 310.1 196 81.1
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 2.4e-82 309.7 210 75.7
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 3.2e-82 309.3 210 77.6
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 5.4e-82 308.5 324 64.8
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 9.2e-82 307.8 196 81.6
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 1.2e-81 307.4 211 77.7
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 1.6e-81 307.0 211 77.7
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.6e-81 307.0 204 76.5
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 2.0e-81 306.6 210 77.6
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 4.6e-81 305.4 199 77.9
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 7.8e-81 304.7 196 81.6
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 3.0e-80 302.8 214 75.2
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 5.0e-80 302.0 215 74.9
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.1e-79 300.8 180 86.1
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.9e-79 300.1 212 74.5
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 4.3e-79 298.9 207 75.4
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 5.6e-79 298.5 207 73.9
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.2e-78 297.4 209 74.6
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.2e-78 297.4 210 73.8
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.6e-78 297.0 212 74.1
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 2.1e-78 296.6 217 72.8
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 2.1e-78 296.6 214 74.8
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 2.8e-78 296.2 213 74.2
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 3.6e-78 295.8 212 74.1
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 4.7e-78 295.4 210 73.3
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 4.7e-78 295.4 210 73.3
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 8.0e-78 294.7 213 73.2
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.1e-77 294.3 213 73.7
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 1.1e-77 294.3 211 72.5
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.8e-77 293.5 210 72.9
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 4.0e-77 292.4 210 72.4
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.2e-76 290.8 211 75.4
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.2e-76 290.8 213 72.8
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 3.4e-76 289.3 284 64.4
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.7e-75 287.0 210 71.9
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.2e-75 286.6 208 75.0
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 8.3e-75 284.6 173 85.5
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.6e-73 280.4 268 61.2
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 4.6e-73 278.9 210 71.0
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.0e-72 277.7 199 71.9
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 3.9e-72 275.8 208 69.7
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.9e-72 275.8 208 69.7
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.6e-72 274.6 208 69.7
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 1.1e-71 274.2 281 58.0
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.6e-70 269.2 212 68.4
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.6e-70 269.2 212 68.4
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 8.1e-70 268.1 317 53.9
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 1.1e-69 267.7 219 70.8
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 9.9e-68 261.2 237 61.2
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 9.9e-68 261.2 211 68.7
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.7e-65 253.1 206 66.5
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 4.3e-63 245.7 215 66.0
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.4e-61 240.7 211 65.9
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.4e-61 240.0 207 64.7
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 8.4e-59 231.5 335 45.7
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 5.1e-56 222.2 133 86.5
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 1.5e-55 220.7 216 60.2
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 6.2e-54 215.3 290 50.7
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 2.5e-47 193.4 158 68.4
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 2.8e-46 189.9 156 64.7
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.6e-44 183.3 181 59.7
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.1e-39 167.9 132 70.5
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 3.2e-34 149.8 100 79.0
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 1.8e-29 134.0 100 72.0
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 5.8e-28 129.0 77 84.4
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.2e-20 104.8 77 67.5
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.2e-20 104.8 68 73.5
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.9e-19 100.1 74 70.3
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 5.1e-16 89.4 124 46.0
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 4.5e-12 76.3 42 85.7
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 5.5e-10 69.3 37 91.9
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.2e-09 68.2 114 43.9
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 1.5e-07 61.2 72 52.8
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 3.3e-07 60.1 113 38.1


User provided reference genes

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